SSR-seq: Genotyping of microsatellites using next-generation sequencing reveals higher level of polymorphism as compared to traditional fragment size scoring

Genotyping-by-sequencing of genome-wide microsatellite loci reveals fine-scale harvest composition in a coastal Atlantic salmon fishery

(2018) Ian R. Bradbury et al.   Evolutionary Applications

Is evolution of apomicts driven by the phylogeography of the sexual ancestor? Insights from European and Caucasian brambles (Rubus , Rosaceae)

(2017) Michal Sochor et al.   JOURNAL OF BIOGEOGRAPHY

Tabula rasa in the Patagonian Channels? The phylogeography of Oreobolus obtusangulus (Cyperaceae)

(2017) Simon Pfanzelt et al.   MOLECULAR ECOLOGY

megasat: automated inference of microsatellite genotypes from sequence data

(2016) Luyao Zhan et al.   Molecular Ecology Resources

High-throughput microsatellite genotyping in ecology: improved accuracy, efficiency, standardization and success with low-quantity and degraded DNA

(2016) M. De Barba et al.   Molecular Ecology Resources

Are Microsatellite Fragment Lengths Useful for Population-Level Studies? The Case ofPolygala lewtonii(Polygalaceae)

(2016) Charlotte C. Germain-Aubrey et al.   Applications in Plant Sciences

The Report of My Death was an Exaggeration: A Review for Researchers Using Microsatellites in the 21st Century

(2016) Richard G. J. Hodel et al.   Applications in Plant Sciences

A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding

(2016) Salla Vartia et al.   Royal Society Open Science

Species-Level Phylogeny and Polyploid Relationships inHordeum(Poaceae) Inferred by Next-Generation Sequencing andIn SilicoCloning of Multiple Nuclear Loci

(2015) Jonathan Brassac et al.   SYSTEMATIC BIOLOGY

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Always Look on Both Sides: Phylogenetic Information Conveyed by Simple Sequence Repeat Allele Sequences

(2012) Stéphanie Barthe et al.   PLoS One

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

Evolution of the mutation rate

(2010) Michael Lynch   TRENDS IN GENETICS

What phylogeny and gene genealogy analyses reveal about homoplasy in citrus microsatellite alleles

(2009) Noelle A. Barkley et al.   PLANT SYSTEMATICS AND EVOLUTION