Draft genomes of Cronobacter sakazakii strains isolated from dried spices bring unique insights into the diversity of plant-associated strains
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Draft genomes of Cronobacter sakazakii strains isolated from dried spices bring unique insights into the diversity of plant-associated strains
Authors
Keywords
<em class="EmphasisTypeItalic ">Cronobacter sakazakii</em>, WGS, Draft Genomes, Plant-origin, Dried Spices
Journal
Standards in Genomic Sciences
Volume 13, Issue 1, Pages -
Publisher
Springer Nature
Online
2018-11-29
DOI
10.1186/s40793-018-0339-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genomics of foodborne pathogens for microbial food safety
- (2018) Marc W Allard et al. CURRENT OPINION IN BIOTECHNOLOGY
- Updates on the Cronobacter Genus
- (2018) Stephen J. Forsythe Annual Review of Food Science and Technology
- Genomic characterization of malonate positive Cronobacter sakazakii serotype O:2, sequence type 64 strains, isolated from clinical, food, and environment samples
- (2018) Gopal R. Gopinath et al. Gut Pathogens
- RNA Sequencing-Based Transcriptional Overview of Xerotolerance in Cronobacter sakazakii SP291
- (2018) Shabarinath Srikumar et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbiological quality of selected ready-to-eat leaf vegetables, sprouts and non-pasteurized fresh fruit-vegetable juices including the presence of Cronobacter spp.
- (2017) Anna Berthold-Pluta et al. FOOD MICROBIOLOGY
- Comparative Genomic Characterization of the Highly Persistent and Potentially Virulent Cronobacter sakazakii ST83, CC65 Strain H322 and Other ST83 Strains
- (2017) Hannah R. Chase et al. Frontiers in Microbiology
- Practical Value of Food Pathogen Traceability through Building a Whole-Genome Sequencing Network and Database
- (2016) Marc W. Allard et al. JOURNAL OF CLINICAL MICROBIOLOGY
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Whole-Transcriptome Analysis of Verocytotoxigenic Escherichia coli O157:H7 (Sakai) Suggests Plant-Species-Specific Metabolic Responses on Exposure to Spinach and Lettuce Extracts
- (2016) Louise Crozier et al. Frontiers in Microbiology
- kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome: Table 1
- (2015) Shea N Gardner et al. BIOINFORMATICS
- The speciation and genotyping of Cronobacter isolates from hospitalised patients
- (2015) A. Alsonosi et al. EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES
- eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
- (2015) Jaime Huerta-Cepas et al. NUCLEIC ACIDS RESEARCH
- New insights into the biological role of the osmoregulated periplasmic glucans in pathogenic and symbiotic bacteria
- (2015) Sébastien Bontemps-Gallo et al. Environmental Microbiology Reports
- Occurrence and prevalence of Cronobacter spp. in plant and animal derived food sources: a systematic review and meta-analysis
- (2015) Norrakiah Abdullah Sani et al. SpringerPlus
- The transport and mediation mechanisms of the common sugars in Escherichia coli
- (2014) Yane Luo et al. BIOTECHNOLOGY ADVANCES
- Possible reservoir and routes of transmission of Cronobacter (Enterobacter sakazakii) via wheat flour
- (2014) Xiuqin Lou et al. FOOD CONTROL
- Molecular Mechanisms Associated with Xylan Degradation byXanthomonasPlant Pathogens
- (2014) Camila Ramos Santos et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Cronobacter: an emergent pathogen causing meningitis to neonates through their feeds
- (2014) Ben D. Tall et al. SCIENCE PROGRESS
- Pan-genome analysis of the emerging foodborne pathogen Cronobacter spp. suggests a species-level bidirectional divergence driven by niche adaptation
- (2013) Christopher J Grim et al. BMC GENOMICS
- Complete genome sequence and phenotype microarray analysis of Cronobacter sakazakii SP291: a persistent isolate cultured from a powdered infant formula production facility
- (2013) Qiongqiong Yan et al. Frontiers in Microbiology
- Diversity of the Cronobacter Genus as Revealed by Multilocus Sequence Typing
- (2012) S. Joseph et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Evaluation of a Revised U.S. Food and Drug Administration Method for the Detection of Cronobacter in Powdered Infant Formula: A Collaborative Study
- (2012) YI CHEN et al. JOURNAL OF FOOD PROTECTION
- Isolation and Characterization of Cronobacter from Desiccated Foods in Korea
- (2012) Jung-Whan Chon et al. JOURNAL OF FOOD SCIENCE
- Top 10 plant pathogenic bacteria in molecular plant pathology
- (2012) JOHN MANSFIELD et al. MOLECULAR PLANT PATHOLOGY
- Prevention of Invasive Cronobacter Infections in Young Infants Fed Powdered Infant Formulas
- (2012) J. Jason PEDIATRICS
- Functional Metagenomics of Escherichia coli O157:H7 Interactions with Spinach Indigenous Microorganisms during Biofilm Formation
- (2012) Michelle Q. Carter et al. PLoS One
- Characterization of Putative Virulence Genes on the Related RepFIB Plasmids Harbored by Cronobacter spp.
- (2011) A. A. Franco et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- BIGSdb: Scalable analysis of bacterial genome variation at the population level
- (2011) Keith A Jolley et al. BMC BIOINFORMATICS
- Virulence traits in Cronobacter species isolated from different sources
- (2011) Ariadnna Cruz et al. CANADIAN JOURNAL OF MICROBIOLOGY
- Cronobacter condimenti sp. nov., isolated from spiced meat, and Cronobacter universalis sp. nov., a species designation for Cronobacter sp. genomospecies 1, recovered from a leg infection, water and food ingredients
- (2011) S. Joseph et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- A study into the occurrence of Cronobacter spp. in The Netherlands between 2001 and 2005
- (2010) M.C. Kandhai et al. FOOD CONTROL
- Survival characteristics of environmental and clinically derived strains of Cronobacter sakazakii in infant milk formula (IMF) and ingredients
- (2010) D. Walsh et al. JOURNAL OF APPLIED MICROBIOLOGY
- Complete Genome Sequence of Cronobacter turicensis LMG 23827, a Food-Borne Pathogen Causing Deaths in Neonates
- (2010) R. Stephan et al. JOURNAL OF BACTERIOLOGY
- Genome Sequence of Cronobacter sakazakii BAA-894 and Comparative Genomic Hybridization Analysis with Other Cronobacter Species
- (2010) Eva Kucerova et al. PLoS One
- Isolation of Cronobacter spp. (formerly Enterobacter sakazakii) from infant food, herbs and environmental samples and the subsequent identification and confirmation of the isolates using biochemical, chromogenic assays, PCR and 16S rRNA sequencing
- (2009) Ziad W Jaradat et al. BMC MICROBIOLOGY
- Desiccation resistance and persistence of Cronobacter species in infant formula
- (2009) T. Osaili et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Evidence for a plant-associated natural habitat for Cronobacter spp.
- (2009) Michael Schmid et al. RESEARCH IN MICROBIOLOGY
- A short review on SSF – an interesting process option for ethanol production from lignocellulosic feedstocks
- (2008) Kim Olofsson et al. Biotechnology for Biofuels
- The RAST Server: Rapid Annotations using Subsystems Technology
- (2008) Ramy K Aziz et al. BMC GENOMICS
- Cronobacter gen. nov., a new genus to accommodate the biogroups of Enterobacter sakazakii, and proposal of Cronobacter sakazakii gen. nov., comb. nov., Cronobacter malonaticus sp. nov., Cronobacter turicensis sp. nov., Cronobacter muytjensii sp. nov., Cronobacter dublinensis sp. nov., Cronobacter genomospecies 1, and of three subspecies, Cronobacter dublinensis subsp. dublinensis subsp. nov., Cronobacter dublinensis subsp. lausannensis subsp. nov. and Cronobacter dublinensis subsp. lactaridi subsp. nov.
- (2008) C. Iversen et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Effect of Desiccation, Starvation, Heat, and Cold Stresses on the Thermal Resistance ofEnterobacter sakazakiiin Rehydrated Infant Milk Formula
- (2008) R.R. Shaker et al. JOURNAL OF FOOD SCIENCE
- The minimum information about a genome sequence (MIGS) specification
- (2008) Dawn Field et al. NATURE BIOTECHNOLOGY
- Enterobacter sakazakii: An Emerging Pathogen in Infants and Neonates
- (2008) Catherine J. Hunter et al. Surgical Infections
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now