Whole Genome Characterization of Orthopoxvirus (OPV) Abatino, a Zoonotic Virus Representing a Putative Novel Clade of Old World Orthopoxviruses

Occupational transmission of an Orthopoxvirus infection during an outbreak in a colony of Macaca tonkeana in Lazio Region, Italy, 2015

(2018) V. Puro et al.   Zoonoses and Public Health

Genome Sequences of Akhmeta Virus, an Early Divergent Old World Orthopoxvirus

(2018) Jinxin Gao et al.   Viruses-Basel

Understanding orthopoxvirus host range and evolution: from the enigmatic to the usual suspects

(2018) Mary G Reynolds et al.   Current Opinion in Virology

Seasonal recurrence of cowpox virus outbreaks in captive cheetahs (Acinonyx jubatus)

(2017) Julia Stagegaard et al.   PLoS One

Cowpox virus: What’s in a Name?

(2017) Matthew Mauldin et al.   Viruses-Basel

Experimental Cowpox Virus (CPXV) Infections of Bank Voles: Exceptional Clinical Resistance and Variable Reservoir Competence

(2017) Annika Franke et al.   Viruses-Basel

Epidemiological Investigations of Four Cowpox Virus Outbreaks in Alpaca Herds, Germany

(2017) Almut Prkno et al.   Viruses-Basel

Classification of Cowpox Viruses into Several Distinct Clades and Identification of a Novel Lineage

(2017) Annika Franke et al.   Viruses-Basel

The genomes of three North American orthopoxviruses

(2016) Chad Smithson et al.   VIRUS GENES

Evidence of zoonotic Poxviridae coinfections in clinically diagnosed papillomas using a newly developed mini-array test

(2015) Alessandra Scagliarini et al.   JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION

Out of the Reservoir: Phenotypic and Genotypic Characterization of a Novel Cowpox Virus Isolated from a Common Vole

(2015) Donata Hoffmann et al.   JOURNAL OF VIROLOGY

RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data

(2015) Simon H. Tausch et al.   PLoS One

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

The genome sequence of ectromelia virus Naval and Cornell isolates from outbreaks in North America

(2014) Carla Mavian et al.   VIROLOGY

Genome-Wide Comparison of Cowpox Viruses Reveals a New Clade Related to Variola Virus

(2013) Piotr Wojtek Dabrowski et al.   PLoS One

Poxvirus DNA Replication

(2013) B. Moss   Cold Spring Harbor Perspectives in Biology

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

A survey of host range genes in poxvirus genomes

(2012) Kirsten A. Bratke et al.   INFECTION GENETICS AND EVOLUTION

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Chasing Jenner's Vaccine: Revisiting Cowpox Virus Classification

(2011) Darin S. Carroll et al.   PLoS One

Orthopoxvirus Genome Evolution: The Role of Gene Loss

(2010) Robert Curtis Hendrickson et al.   Viruses-Basel

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

The evolutionary biology of poxviruses

(2009) Austin L. Hughes et al.   INFECTION GENETICS AND EVOLUTION

The Phylogenetics and Ecology of the Orthopoxviruses Endemic to North America

(2009) Ginny L. Emerson et al.   PLoS One

Identification of multiple independent horizontal gene transfers into poxviruses using a comparative genomics approach

(2008) Kirsten A Bratke et al.   BMC EVOLUTIONARY BIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH