Hi-TOM: a platform for high-throughput tracking of mutations induced by CRISPR/Cas systems

CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing

(2017) Xianrong Xie et al.   Molecular Plant

Anything impossible with CRISPR/Cas9?

(2017) Renjie Jiao et al.   Science China-Life Sciences

CRISPR/Cas9-mediated base-editing system efficiently generates gain-of-function mutations in Arabidopsis

(2017) Yiyu Chen et al.   Science China-Life Sciences

Rapid generation of genetic diversity by multiplex CRISPR/Cas9 genome editing in rice

(2017) Lan Shen et al.   Science China-Life Sciences

CRISPR/Cas9 system: a powerful technology for in vivo and ex vivo gene therapy

(2017) Xiaohui Zhang et al.   Science China-Life Sciences

Current and future editing reagent delivery systems for plant genome editing

(2017) Yidong Ran et al.   Science China-Life Sciences

Cas-analyzer: an online tool for assessing genome editing results using NGS data

(2016) Jeongbin Park et al.   BIOINFORMATICS

CrispRVariants charts the mutation spectrum of genome engineering experiments

(2016) Helen Lindsay et al.   NATURE BIOTECHNOLOGY

Analyzing CRISPR genome-editing experiments with CRISPResso

(2016) Luca Pinello et al.   NATURE BIOTECHNOLOGY

Coming of age: ten years of next-generation sequencing technologies

(2016) Sara Goodwin et al.   NATURE REVIEWS GENETICS

BATCH-GE: Batch analysis of Next-Generation Sequencing data for genome editing assessment

(2016) Annekatrien Boel et al.   Scientific Reports

caRpools: an R package for exploratory data analysis and documentation of pooled CRISPR/Cas9 screens

(2015) Jan Winter et al.   BIOINFORMATICS

AGEseq: Analysis of Genome Editing by Sequencing

(2015) Liang-Jiao Xue et al.   Molecular Plant

Genome editing assessment using CRISPR Genome Analyzer (CRISPR-GA)

(2014) M. Guell et al.   BIOINFORMATICS

A high-throughput screening strategy for detecting CRISPR-Cas9 induced mutations using next-generation sequencing

(2014) Charles C Bell et al.   BMC GENOMICS

Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew

(2014) Yanpeng Wang et al.   NATURE BIOTECHNOLOGY

Easy quantitative assessment of genome editing by sequence trace decomposition

(2014) Eva K. Brinkman et al.   NUCLEIC ACIDS RESEARCH

The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation

(2014) Hui Zhang et al.   PLANT BIOTECHNOLOGY JOURNAL

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS