Genome wide characterization of barley NAC transcription factors enables the identification of grain-specific transcription factors exclusive for the Poaceae family of monocotyledonous plants

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations

(2017) Bernardo J. Clavijo et al.   GENOME RESEARCH

The NAC Transcription Factor Gene OsY37 (ONAC011) Promotes Leaf Senescence and Accelerates Heading Time in Rice

(2017) Yousra El Mannai et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A chromosome conformation capture ordered sequence of the barley genome

(2017) Martin Mascher et al.   NATURE

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species

(2017) Paul Julian Kersey et al.   NUCLEIC ACIDS RESEARCH

Towards a whole-genome sequence for rye (Secale cerealeL.)

(2017) Eva Bauer et al.   PLANT JOURNAL

Wild emmer genome architecture and diversity elucidate wheat evolution and domestication

(2017) Raz Avni et al.   SCIENCE

Genome-Wide Sequence and Expression Analysis of the NAC Transcription Factor Family in Polyploid Wheat

(2017) Philippa Borrill et al.   G3-Genes Genomes Genetics

The Interplay of Chromatin Landscape and DNA-Binding Context Suggests Distinct Modes of EIN3 Regulation in Arabidopsis thaliana

(2017) Elena V. Zemlyanskaya et al.   Frontiers in Plant Science

A simple method to control over-alignment in the MAFFT multiple sequence alignment program

(2016) Kazutaka Katoh et al.   BIOINFORMATICS

Structures and Short Linear Motif of Disordered Transcription Factor Regions Provide Clues to the Interactome of the Cellular Hub Protein Radical-induced Cell Death1

(2016) Charlotte O'Shea et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

expVIP: a Customizable RNA-seq Data Analysis and Visualization Platform

(2016) Philippa Borrill et al.   PLANT PHYSIOLOGY

The NAC transcription factor ANAC046 is a positive regulator of chlorophyll degradation and senescence in Arabidopsis leaves

(2016) Chihiro Oda-Yamamizo et al.   Scientific Reports

Three Rice NAC Transcription Factors Heteromerize and Are Associated with Seed Size

(2016) Iny Elizebeth Mathew et al.   Frontiers in Plant Science

Protein intrinsic disorder inArabidopsisNAC transcription factors: transcriptional activation by ANAC013 and ANAC046 and their interactions with RCD1

(2015) Charlotte O’Shea et al.   BIOCHEMICAL JOURNAL

The arabidopsis information resource: Making and mining the “gold standard” annotated reference plant genome

(2015) Tanya Z. Berardini et al.   GENESIS

BARLEX – the Barley Draft Genome Explorer

(2015) Christian Colmsee et al.   Molecular Plant

PlantPAN 2.0: an update of plant promoter analysis navigator for reconstructing transcriptional regulatory networks in plants

(2015) Chi-Nga Chow et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence

(2015) Hironori Takasaki et al.   PLANT JOURNAL

Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast

(2015) Zsolt Kelemen et al.   PLoS One

NbClust: AnRPackage for Determining the Relevant Number of Clusters in a Data Set

(2015) Malika Charrad et al.   Journal of Statistical Software

Systematic Analysis and Identification of Stress-Responsive Genes of the NAC Gene Family in Brachypodium distachyon

(2015) Jun You et al.   PLoS One

Comparative Genomics of NAC Transcriptional Factors in Angiosperms: Implications for the Adaptation and Diversification of Flowering Plants

(2015) Alejandro Pereira-Santana et al.   PLoS One

Molecular Characterization and Expression Profiling of NAC Transcription Factors in Brachypodium distachyon L

(2015) Gengrui Zhu et al.   PLoS One

Members of the barley NAC transcription factor gene family show differential co-regulation with senescence-associated genes during senescence of flag leaves

(2014) Michael W. Christiansen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Gene regulatory cascade of senescence-associated NAC transcription factors activated by ETHYLENE-INSENSITIVE2-mediated leaf senescence signalling in Arabidopsis

(2014) Hyo Jung Kim et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Protein Phosphatase RCF2 and Its Interacting Partner NAC019 Are Critical for Heat Stress-Responsive Gene Regulation and Thermotolerance in Arabidopsis

(2014) Q. Guan et al.   PLANT CELL

Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots

(2014) Albero Cenci et al.   PLANT MOLECULAR BIOLOGY

Contribution of NAC Transcription Factors to Plant Adaptation to Land

(2014) B. Xu et al.   SCIENCE

Conserved cis-regulatory modules in promoters of genes encoding wheat high-molecular-weight glutenin subunits

(2014) Catherine Ravel et al.   Frontiers in Plant Science

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Draft genome of the wheat A-genome progenitor Triticum urartu

(2013) Hong-Qing Ling et al.   NATURE

PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors

(2013) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Control of cell proliferation, endoreduplication, cell size, and cell death by the retinoblastoma-related pathway in maize endosperm

(2013) P. A. Sabelli et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Roles of NAC transcription factors in the regulation of biotic and abiotic stress responses in plants

(2013) Mohammed Nuruzzaman et al.   Frontiers in Microbiology

Comprehensive Analysis of NAC Domain Transcription Factor Gene Family in Populus trichocarpa

(2012) Ruibo Hu et al.   BMC PLANT BIOLOGY

Molecular characterization of banana NAC transcription factors and their interactions with ethylene signalling component EIL during fruit ripening

(2012) Wei Shan et al.   JOURNAL OF EXPERIMENTAL BOTANY

A physical, genetic and functional sequence assembly of the barley genome

(2012)   NATURE

NAC proteins: regulation and role in stress tolerance

(2012) Swati Puranik et al.   TRENDS IN PLANT SCIENCE

NAC transcription factors in plant abiotic stress responses

(2011) Kazuo Nakashima et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

PHYLOGENETIC ANALYSES UNRAVEL THE EVOLUTIONARY HISTORY OF NAC PROTEINS IN PLANTS

(2011) Tingting Zhu et al.   EVOLUTION

Senescence-associated Barley NAC (NAM, ATAF1,2, CUC) Transcription Factor Interacts with Radical-induced Cell Death 1 through a Disordered Regulatory Domain

(2011) Trine Kjaersgaard et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana

(2011) Salma Balazadeh et al.   Molecular Plant

Genome-wide analysis of NAC transcription factor family in rice

(2010) Mohammed Nuruzzaman et al.   GENE

The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice

(2010) Hironori Takasaki et al.   MOLECULAR GENETICS AND GENOMICS

A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence

(2010) Salma Balazadeh et al.   PLANT JOURNAL

Genome-Wide Analysis of Ethylene-Responsive Element Binding Factor-Associated Amphiphilic Repression Motif-Containing Transcriptional Regulators in Arabidopsis

(2010) S. Kagale et al.   PLANT PHYSIOLOGY

Plant NAC-type transcription factor proteins contain a NARD domain for repression of transcriptional activation

(2010) Yu-Jun Hao et al.   PLANTA

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Evolutionary conservation of the transcriptional network regulating secondary cell wall biosynthesis

(2010) Ruiqin Zhong et al.   TRENDS IN PLANT SCIENCE

Overexpression of a NAC transcription factor enhances rice drought and salt tolerance

(2009) Xingnan Zheng et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

TheArabidopsis thalianaNAC transcription factor family: structure–function relationships and determinants of ANAC019 stress signalling

(2009) Michael K. Jensen et al.   BIOCHEMICAL JOURNAL

A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production

(2009) Hui Shen et al.   BioEnergy Research

Complete inventory of soybean NAC transcription factors: Sequence conservation and expression analysis uncover their distinct roles in stress response

(2009) Guilherme L. Pinheiro et al.   GENE

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

PlnTFDB: updated content and new features of the plant transcription factor database

(2009) Paulino Pérez-Rodríguez et al.   NUCLEIC ACIDS RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

The Development of Endosperm in Grasses

(2009) P. A. Sabelli et al.   PLANT PHYSIOLOGY

Trifurcate Feed-Forward Regulation of Age-Dependent Cell Death Involving miR164 in Arabidopsis

(2009) J. H. Kim et al.   SCIENCE

Transcriptome analysis of grain development in hexaploid wheat

(2008) Yongfang Wan et al.   BMC GENOMICS

Role of the Arabidopsis thaliana NAC transcription factors ANAC019 and ANAC055 in regulating jasmonic acid-signaled defense responses

(2008) Qingyun Bu et al.   CELL RESEARCH

Tobacco Transcription Factors: Novel Insights into Transcriptional Regulation in the Solanaceae

(2008) P. J. Rushton et al.   PLANT PHYSIOLOGY

GRASSIUS: A Platform for Comparative Regulatory Genomics across the Grasses

(2008) A. Yilmaz et al.   PLANT PHYSIOLOGY