The impact of a fine-scale population stratification on rare variant association test results

DoEstRare: A statistical test to identify local enrichments in rare genomic variants associated with disease

(2017) Elodie Persyn et al.   PLoS One

Rare-Variant Association Analysis: Study Designs and Statistical Tests

(2014) Seunggeung Lee et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Fine-scale human genetic structure in Western France

(2014) Matilde Karakachoff et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Analysis of rare variant population structure in Europeans explains differential stratification of gene-based tests

(2014) Matthew Zawistowski et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Association Testing of Clustered Rare Causal Variants in Case-Control Studies

(2014) Wan-Yu Lin   PLoS One

An adaptive permutation approach for genome-wide association study: evaluation and recommendations for use

(2014) Ronglin Che et al.   BioData Mining

Marbled Inflation From Population Structure in Gene-Based Association Studies With Rare Variants

(2013) Qianying Liu et al.   GENETIC EPIDEMIOLOGY

Detecting genomic clustering of risk variants from sequence data: cases versus controls

(2013) Daniel J. Schaid et al.   HUMAN GENETICS

Assessing the Impact of Population Stratification on Association Studies of Rare Variation

(2013) Yunxuan Jiang et al.   HUMAN HEREDITY

Fine-Scale Patterns of Population Stratification Confound Rare Variant Association Tests

(2013) Timothy D. O’Connor et al.   PLoS One

A Hybrid Likelihood Model for Sequence-Based Disease Association Studies

(2013) Yun-Ching Chen et al.   PLoS Genetics

A Permutation Procedure to Correct for Confounders in Case-Control Studies, Including Tests of Rare Variation

(2012) Michael P. Epstein et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Scan-Statistic Approach Identifies Clusters of Rare Disease Variants in LRP2, a Gene Linked and Associated with Autism Spectrum Disorders, in Three Datasets

(2012) Iuliana Ionita-Laza et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Optimal Unified Approach for Rare-Variant Association Testing with Application to Small-Sample Case-Control Whole-Exome Sequencing Studies

(2012) Seunggeun Lee et al.   AMERICAN JOURNAL OF HUMAN GENETICS

'Location, Location, Location': a spatial approach for rare variant analysis and an application to a study on non-syndromic cleft lip with or without cleft palate

(2012) H. Fier et al.   BIOINFORMATICS

Optimal tests for rare variant effects in sequencing association studies

(2012) S. Lee et al.   BIOSTATISTICS

Adjustment for Population Stratification via Principal Components in Association Analysis of Rare Variants

(2012) Yiwei Zhang et al.   GENETIC EPIDEMIOLOGY

Differential confounding of rare and common variants in spatially structured populations

(2012) Iain Mathieson et al.   NATURE GENETICS

Rare and Low Frequency Variant Stratification in the UK Population: Description and Impact on Association Tests

(2012) Marie-Claude Babron et al.   PLoS One

Evolution and Functional Impact of Rare Coding Variation from Deep Sequencing of Human Exomes

(2012) J. A. Tennessen et al.   SCIENCE

Rare-Variant Association Testing for Sequencing Data with the Sequence Kernel Association Test

(2011) Michael C. Wu et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Inflated type I error rates when using aggregation methods to analyze rare variants in the 1000 Genomes Project exon sequencing data in unrelated individuals: summary results from Group 7 at Genetic Analysis Workshop 17

(2011) Nathan Tintle et al.   GENETIC EPIDEMIOLOGY

Adaptive tests for association analysis of rare variants

(2011) Wei Pan et al.   GENETIC EPIDEMIOLOGY

Demographic history and rare allele sharing among human populations

(2011) S. Gravel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Testing for an Unusual Distribution of Rare Variants

(2011) Benjamin M. Neale et al.   PLoS Genetics

Pooled Association Tests for Rare Variants in Exon-Resequencing Studies

(2010) Alkes L. Price et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A Data-Adaptive Sum Test for Disease Association with Multiple Common or Rare Variants

(2010) Fang Han et al.   HUMAN HEREDITY

Deep resequencing reveals excess rare recent variants consistent with explosive population growth

(2010) Alex Coventry et al.   Nature Communications

A Novel Adaptive Method for the Analysis of Next-Generation Sequencing Data to Detect Complex Trait Associations with Rare Variants Due to Gene Main Effects and Interactions

(2010) Dajiang J. Liu et al.   PLoS Genetics

An evaluation of statistical approaches to rare variant analysis in genetic association studies

(2009) Andrew P. Morris et al.   GENETIC EPIDEMIOLOGY

Genetic Structure of Europeans: A View from the North–East

(2009) Mari Nelis et al.   PLoS One

A Groupwise Association Test for Rare Mutations Using a Weighted Sum Statistic

(2009) Bo Eskerod Madsen et al.   PLoS Genetics

Methods for Detecting Associations with Rare Variants for Common Diseases: Application to Analysis of Sequence Data

(2008) Bingshan Li et al.   AMERICAN JOURNAL OF HUMAN GENETICS