A chromosome-scale genome assembly reveals a highly dynamic effector repertoire of wheat powdery mildew

Signatures of host specialization and a recent transposable element burst in the dynamic one-speed genome of the fungal barley powdery mildew pathogen

(2018) Lamprinos Frantzeskakis et al.   BMC GENOMICS

Cereal powdery mildew effectors: a complex toolbox for an obligate pathogen

(2018) Salim Bourras et al.   CURRENT OPINION IN MICROBIOLOGY

Distinct domains of the AVRPM3A2/F2 avirulence protein from wheat powdery mildew are involved in immune receptor recognition and putative effector function

(2018) Kaitlin Elyse McNally et al.   NEW PHYTOLOGIST

De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust

(2018) Marisa E. Miller et al.   mBio

Non-parent of Origin Expression of Numerous Effector Genes Indicates a Role of Gene Regulation in Host Adaption of the Hybrid Triticale Powdery Mildew Pathogen

(2018) Coraline R. Praz et al.   Frontiers in Plant Science

Distinct Trajectories of Massive Recent Gene Gains and Losses in Populations of a Microbial Eukaryotic Pathogen

(2017) Fanny E. Hartmann et al.   MOLECULAR BIOLOGY AND EVOLUTION

High-resolution mapping of the recombination landscape of the phytopathogen Fusarium graminearum suggests two-speed genome evolution

(2017) Benoit Laurent et al.   MOLECULAR PLANT PATHOLOGY

Evolution and genome architecture in fungal plant pathogens

(2017) Mareike Möller et al.   NATURE REVIEWS MICROBIOLOGY

Cereal immunity against powdery mildews targets RNase-Like Proteins associated with Haustoria (RALPH) effectors evolved from a common ancestral gene

(2017) Pietro D. Spanu   NEW PHYTOLOGIST

A mobile pathogenicity chromosome in Fusarium oxysporum for infection of multiple cucurbit species

(2017) Peter van Dam et al.   Scientific Reports

The repetitive landscape of the 5100 Mbp barley genome

(2017) Thomas Wicker et al.   Mobile DNA

The Genome Biology of Effector Gene Evolution in Filamentous Plant Pathogens

(2016) Andrea Sánchez-Vallet et al.   Annual Review of Phytopathology

Homoeologous recombination in the presence of Ph1 gene in wheat

(2016) Dal-Hoe Koo et al.   CHROMOSOMA

A Tale of Genome Compartmentalization: The Evolution of Virulence Clusters in Smut Fungi

(2016) Julien Y. Dutheil et al.   Genome Biology and Evolution

Interactions between the Powdery Mildew Effector BEC1054 and Barley Proteins Identify Candidate Host Targets

(2016) Helen G. Pennington et al.   JOURNAL OF PROTEOME RESEARCH

A gapless genome sequence of the fungusBotrytis cinerea

(2016) Jan A. L. Van Kan et al.   MOLECULAR PLANT PATHOLOGY

Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species

(2016) Fabrizio Menardo et al.   NATURE GENETICS

Phased diploid genome assembly with single-molecule real-time sequencing

(2016) Chen-Shan Chin et al.   NATURE METHODS

AvrPm2 encodes an RNase-like avirulence effector which is conserved in the two different specialized forms of wheat and rye powdery mildew fungus

(2016) Coraline R. Praz et al.   NEW PHYTOLOGIST

Allelic barley MLA immune receptors recognize sequence-unrelated avirulence effectors of the powdery mildew pathogen

(2016) Xunli Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Barley Powdery Mildew Effector Candidates CSEP0081 and CSEP0254 Promote Fungal Infection Success

(2016) Ali Abdurehim Ahmed et al.   PLoS One

The two-speed genomes of filamentous pathogens: waltz with plants

(2015) Suomeng Dong et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Genetic and molecular characterization of a locus involved in avirulence of Blumeria graminis f. sp. tritici on wheat Pm3 resistance alleles

(2015) Francis Parlange et al.   FUNGAL GENETICS AND BIOLOGY

The Impact of Recombination Hotspots on Genome Evolution of a Fungal Plant Pathogen

(2015) D. Croll et al.   GENETICS

Meiotic recombination hotspots - a comparative view

(2015) Kyuha Choi et al.   PLANT JOURNAL

Where to cross? New insights into the location of meiotic crossovers

(2015) Christine Mézard et al.   TRENDS IN GENETICS

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Host-Induced Gene Silencing in Barley Powdery Mildew Reveals a Class of Ribonuclease-Like Effectors

(2013) Clara Pliego et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The wheat powdery mildew genome shows the unique evolution of an obligate biotroph

(2013) Thomas Wicker et al.   NATURE GENETICS

Phylogeography and virulence structure of the powdery mildew population on its 'new' host triticale

(2012) Veronique Troch et al.   BMC EVOLUTIONARY BIOLOGY

Structure and evolution of barley powdery mildew effector candidates

(2012) Carsten Pedersen et al.   BMC GENOMICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

(2010) P. D. Spanu et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Repeat-Induced Point Mutation (RIP) as an Alternative Mechanism of Evolution Toward Virulence inLeptosphaeria maculans

(2009) Isabelle Fudal et al.   MOLECULAR PLANT-MICROBE INTERACTIONS