A fast‐evolving X‐linked duplicate of importin‐α2 is overexpressed in sex‐ratio drive in Drosophila neotestacea

The hpRNA/RNAi Pathway Is Essential to Resolve Intragenomic Conflict in the Drosophila Male Germline

(2018) Ching-Jung Lin et al.   DEVELOPMENTAL CELL

X chromosome drive in a widespread Palearctic woodland fly, Drosophila testacea

(2017) G. L. Keais et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Contrasting patterns of X-chromosome divergence underlie multiple sex-ratio polymorphisms in stalk-eyed flies

(2017) K. A. Paczolt et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Occasional recombination of a selfish X-chromosome may permit its persistence at high frequencies in the wild

(2016) K. E. Pieper et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Rapid evolution of a Y-chromosome heterochromatin protein underlies sex chromosome meiotic drive

(2016) Quentin Helleu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Ecology and Evolutionary Dynamics of Meiotic Drive

(2016) Anna K. Lindholm et al.   TRENDS IN ECOLOGY & EVOLUTION

Origin, evolution, and population genetics of the selfishSegregation Distortergene duplication in European and African populations ofDrosophila melanogaster

(2015) Cara L. Brand et al.   EVOLUTION

The Release 6 reference sequence of theDrosophila melanogastergenome

(2015) Roger A. Hoskins et al.   GENOME RESEARCH

Male eyespan size is associated with meiotic drive in wild stalk-eyed flies (Teleopsis dalmanni)

(2014) A J Cotton et al.   HEREDITY

UniProt: a hub for protein information

(2014)   NUCLEIC ACIDS RESEARCH

Meiotic Drive Impacts Expression and Evolution of X-Linked Genes in Stalk-Eyed Flies

(2014) Josephine A. Reinhardt et al.   PLoS Genetics

Nothing in Genetics Makes Sense Except in Light of Genomic Conflict

(2013) William R. Rice   Annual Review of Ecology Evolution and Systematics

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Choreography of importin- /CAS complex assembly and disassembly at nuclear pores

(2013) C. Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Association of polyandry and sex-ratio drive prevalence in natural populations of Drosophila neotestacea

(2013) C. A. Pinzone et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

The Selfish Segregation Distorter Gene Complex of Drosophila melanogaster

(2012) A. M. Larracuente et al.   GENETICS

Genomic conflict drives patterns of X-linked population structure inDrosophila neotestacea

(2012) Kelly A. Dyer et al.   MOLECULAR ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

LOCAL SELECTION UNDERLIES THE GEOGRAPHIC DISTRIBUTION OF SEX-RATIO DRIVE IN DROSOPHILA NEOTESTACEA

(2011) Kelly A. Dyer   EVOLUTION

Birth, Death, and Replacement of Karyopherins in Drosophila

(2011) N. Phadnis et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reduced Polymorphism Associated with X Chromosome Meiotic Drive in the Stalk-Eyed Fly Teleopsis dalmanni

(2011) Sarah J. Christianson et al.   PLoS One

The evolution of gene expression and the transcriptome–phenotype relationship

(2011) Peter W. Harrison et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Sequence Analysis of the Segmental Duplication Responsible for Paris Sex-Ratio Drive in Drosophila simulans

(2011) Lucie Fouvry et al.   G3-Genes Genomes Genetics

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Molecular Evolution of a Y Chromosome to Autosome Gene Duplication in Drosophila

(2010) K. A. Dyer et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Recurrent Selection on the Winters sex-ratio Genes in Drosophila simulans

(2009) S. B. Kingan et al.   GENETICS

Polytene Chromosomal Maps of 11 Drosophila Species: The Order of Genomic Scaffolds Inferred From Genetic and Physical Maps

(2008) S. W. Schaeffer et al.   GENETICS