Reusable building blocks in biological systems

Genome Surfing As Driver of Microbial Genomic Diversity

(2017) Mallory J. Choudoir et al.   TRENDS IN MICROBIOLOGY

Modularity: Genes, Development, and Evolution

(2016) Diogo Melo et al.   Annual Review of Ecology Evolution and Systematics

Regulatory mechanisms of microRNA expression

(2016) Lyudmila F. Gulyaeva et al.   Journal of Translational Medicine

No tradeoff between versatility and robustness in gene circuit motifs

(2016) Joshua L. Payne   PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS

Size distribution of function-based human gene sets and the split–merge model

(2016) Wentian Li et al.   Royal Society Open Science

Gene Frequency Distributions Reject a Neutral Model of Genome Evolution

(2013) Alexander E. Lobkovsky et al.   Genome Biology and Evolution

Dynamical patterning modules in plant development and evolution

(2013) Valeria Hernández-Hernández et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

SIZE DISTRIBUTION OF GENE FAMILIES IN A GENOME

(2013) RYSZARD RUDNICKI et al.   MATHEMATICAL MODELS & METHODS IN APPLIED SCIENCES

Graph clustering with local search optimization: The resolution bias of the objective function matters most

(2013) Twan van Laarhoven et al.   PHYSICAL REVIEW E

Universal distribution of component frequencies in biological and technological systems

(2013) T. Y. Pang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The evolutionary origins of modularity

(2013) J. Clune et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A neutral theory of genome evolution and the frequency distribution of genes

(2012) Bart Haegeman et al.   BMC GENOMICS

NCBI GEO: archive for functional genomics data sets—update

(2012) Tanya Barrett et al.   NUCLEIC ACIDS RESEARCH

Putting genetic interactions in context through a global modular decomposition

(2011) Jeremy Bellay et al.   GENOME RESEARCH

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

The evolution of gene expression levels in mammalian organs

(2011) David Brawand et al.   NATURE

Functional Integrative Levels in the Human Interactome Recapitulate Organ Organization

(2011) Ouissem Souiai et al.   PLoS One

Specialization Can Drive the Evolution of Modularity

(2010) Carlos Espinosa-Soto et al.   PLoS Computational Biology

Dynamical patterning modules: a "pattern language" for development and evolution of multicellular form

(2009) Stuart A. Newman et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Tissue specificity and the human protein interaction network

(2009) Alice Bossi et al.   Molecular Systems Biology

Proteome Organization in a Genome-Reduced Bacterium

(2009) S. Kuhner et al.   SCIENCE

Understanding Modularity in Molecular Networks Requires Dynamics

(2009) R. P. Alexander et al.   Science Signaling

How many human genes can be defined as housekeeping with current expression data?

(2008) Jiang Zhu et al.   BMC GENOMICS

Connecting Genes, Coexpression Modules, and Molecular Signatures to Environmental Stress Phenotypes in Plants

(2008) David J Weston et al.   BMC Systems Biology