4.7 Article

Proteomic Signatures Reveal Differences in Stress Response, Antioxidant Defense and Proteasomal Activity in Fertile Men with High Seminal ROS Levels

Journal

Publisher

MDPI
DOI: 10.3390/ijms20010203

Keywords

seminal plasma; spermatozoa; reactive oxygen species; antioxidants; chemiluminescence; proteomics; bioinformatics; differentially expressed proteins; Western blot

Funding

  1. American Center for Reproductive Medicine, Cleveland Clinic, Ohio, USA
  2. Fundacao para a Ciencia e a Tecnologia (FCT) [SFRH/BD/109284/2015]
  3. Fulbright Program [E0585639]
  4. Fundação para a Ciência e a Tecnologia [SFRH/BD/109284/2015] Funding Source: FCT

Ask authors/readers for more resources

Elevated levels of reactive oxygen species (ROS) are a major cause of male infertility. However, some men with high seminal ROS levels are still fertile. The main objective of this study was to understand the molecular mechanism(s) responsible for the preservation of fertility in those men. Semen samples from fertile men were divided into two groups: control (n = 10, ROS < 102.2 RLU/s/10(6) sperm) and ROS+ (n = 10, ROS > 102.2 RLU/s/10(6) sperm). Proteomic analysis of seminal plasma and spermatozoa was used to identify the differentially expressed proteins (DEPs) between the experimental groups, from which some proteins were validated by Western blot (WB). A total of 44 and 371 DEPs were identified between the study groups in the seminal plasma and spermatozoa, respectively. The identified DEPs were primarily involved in oxidoreductase, endopeptidase inhibitor, and antioxidant activities. We validated by WB the underexpression of NADH:ubiquinone oxidoreductase core subunit S1 (p = 0.01), as well as the overexpression of superoxide dismutase 1 (p = 0.03) and peroxiredoxin 4 (p = 0.04) in spermatozoa of ROS+ group. Our data suggest that fertile men with high ROS levels possess an effective antioxidant defense system that protects sperm proteins, as well as an active proteasomal system for degradation of defective proteins.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Environmental Sciences

Paternal factors in recurrent pregnancy loss: an insight through analysis of non-synonymous single-nucleotide polymorphism in human testis-specific chaperone HSPA2 gene

Gayatri Mohanty, Soumya Ranjan Jena, Sujata Kar, Luna Samanta

Summary: HSPA2 is a testis-specific molecular chaperone that plays a key role in spermatogenesis. Computational analysis revealed 18 deleterious nsSNPs in the HSPA2 gene, suggesting its potential impact on reproductive outcomes. Additionally, gene-gene interaction study identified a close association with antioxidant enzyme SOD1, providing insight into the oxidative scavenging regulatory mechanism in RPL patients.

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2022)

Article Public, Environmental & Occupational Health

Implications of SARS-CoV-2 infection on the clinical, hematological, and inflammatory parameters in COVID-19 patients: A retrospective cross-sectional study

Laila A. Damiati, Sami Bahlas, Ahmed Aljohaney, Yasser Bawazir, Mohammad Mustafa, Iuliana Denetiu, Peter N. Pushparaj

Summary: This study examined the differential regulation of clinical, hematologic, and inflammatory biomarkers in COVID-19 patients of different age groups. Laboratory parameters such as GGT, creatinine, BUN, CRP, procalcitonin, ferritin, and D-dimer were found to be differentially regulated, potentially serving as clinical predictors of disease severity in the population. Age was identified as an important factor influencing the severity of COVID-19.

JOURNAL OF INFECTION AND PUBLIC HEALTH (2022)

Article Pediatrics

Whole-Exome Sequencing Reveals a Missense Variant c.1612C>T (p.Arg538Cys) in the BTD Gene Leading to Neuromyelitis Optica Spectrum Disorder in Saudi Families

Muhammad Imran Naseer, Peter Natesan Pushparaj, Angham Abdulrahman Abdulkareem, Osama Y. Muthaffar

Summary: This case report study presents two pediatric patients with biotinidase deficiency and clinical features of neuromyelitis optica. The intake of biotin resulted in clinical improvement, highlighting that biotinidase deficiency is a treatable cause of neuromyelitis optica.

FRONTIERS IN PEDIATRICS (2022)

Review Orthopedics

Exploring the translational potential of clusterin as a biomarker of early osteoarthritis

Ursule Kalvaityte, Csaba Matta, Eiva Bernotiene, Peter Natesan Pushparaj, Ata M. Kiapour, Ali Mobasheri

Summary: This article reviews the biological roles of clusterin in cartilage, chondrocytes, and other synovial joint tissues, and discusses its potential as a biomarker in synovial and systemic fluids of patients with rheumatoid arthritis (RA) or osteoarthritis (OA). Clusterin has cytoprotective functions and may serve as a biomarker of early repair responses in OA.

JOURNAL OF ORTHOPAEDIC TRANSLATION (2022)

Article Biochemistry & Molecular Biology

Harnessing the potential of dialdehyde alginate-xanthan gum hydrogels as niche bioscaffolds for tissue engineering

Soumya Ranjan Jena, Ganeswar Dalei, Subhraseema Das, Jasmine Nayak, Manoranjan Pradhan, Luna Samanta

Summary: This study fabricated biomimetic bioscaffolds using dialdehyde alginate and xanthan gum, which displayed an ideal porous network structure and exhibited good performance, promoting cell adhesion and proliferation, and demonstrating antibacterial activity. The effectiveness of these scaffolds in tissue engineering applications was confirmed through experimental results.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2022)

Article Fisheries

Seasonal Germ Cell Proliferation and Maturation Patterns in Indian Major Carp, Labeo Rohita (Hamilton, 1822) and Tilapia, Oreochromis Niloticus (Linnaeus, 1758)

Bibekananda Panda, Gopi Krishna Ogirala, Sanjeet Manna, Dhananjay Kumar Verma, Luna Samanta, Padmanav Routray

Summary: This study assessed the seasonal changes in germ cells and maturation of Labeo rohita and Oreochromis niloticus. It revealed different spawning behaviors and germ cell proliferation patterns in the two species. The study provided insights into the reproductive status of fish in response to seasonal climate changes and proposed comparative models for germ cell proliferation and maturation. Scanning electron microscope analysis also showed different developmental stages of germ cells in different seasons.

TURKISH JOURNAL OF FISHERIES AND AQUATIC SCIENCES (2022)

Article Immunology

Comparative proteome profiling of seminal components reveal impaired immune cell signalling as paternal contributors in recurrent pregnancy loss patients

Soumya Ranjan Jena, Jasmine Nayak, Sugandh Kumar, Sujata Kar, Luna Samanta

Summary: Recent evidence suggests that male factors may be involved in recurrent pregnancy loss (RPL), as paternally expressed genes are predominant in the placenta. In this study, proteome profiling was carried out on seminal extracellular vesicles (SEVs), extracellular vesicle free seminal plasma (EVF-SP), and spermatozoa from RPL patients and fertile donors. The differentially expressed proteins in these samples were found to be associated with inflammatory response, immune cell signaling, and apoptosis. This suggests that altered cytokine levels in seminal components may contribute to impaired immune response and improper placental development in RPL.

AMERICAN JOURNAL OF REPRODUCTIVE IMMUNOLOGY (2023)

Article Environmental Sciences

Seasonal Variation of Water Quality Modulated Redox Regulatory System in the Apple Snail Pila globosa and Its Use as a Bioindicator Species in Freshwater Ecosystems across India

Falguni Panda, Samar Gourav Pati, Taslima Nasim Anwar, Luna Samanta, Biswaranjan Paital

Summary: Studies on oxidative stress physiology on molluscs to monitor the aquatic environment, influenced by pollutants and stressors are very limited in general and in Indian apple snails, P. globosa in particular. The main focus of the present study was to establish the baseline data on a redox regulatory system in P. globosa sampled across the Indian subcontinent. Snails were sampled from different zones of India in three seasons (rainy, summer and winter) and the redox regulatory system (levels of antioxidant enzyme activities and small redox regulatory molecules) and oxidative stress indicator (lipid peroxidation) were analyzed. The observed elevated lipid peroxidation level in the summer season accompanied with elevated pH, salinity and temperature indicates induction of stress. In the summer season, the activities of superoxide dismutase (SOD), catalase (CAT) and glutathione reductase (GR) enzymes were augmented, whereas the level of the free -SH group and the activities of glutathione peroxidase (GPx) and glutathione-S-transferase (GST) were found to be increased. Similarly, correlation analysis between the antioxidant system and aquatic parameters revealed that SOD, CAT and GR were influenced by pH as well as salinity, whereas CAT was strongly correlated with temperature. Collectively, our data indicate the use of P. globosa as a model organism to monitor and access the freshwater environment by determining the redox regulatory status of this animal.

WATER (2022)

Article Chemistry, Multidisciplinary

Exploring Steroidal Surfactants as Potential Drug Carriers for an Anticancer Drug Curcumin: An Insight into the Effect of Surfactants? Structure on the Photophysical Properties, Stability, and Activity of Curcumin

Subhrajit Mohanty, Binita Tirkey, Soumya Ranjan Jena, Luna Samanta, Usharani Subuddhi

Summary: Despite the medicinal benefits of curcumin, its practical applications are limited due to poor solubility and bioavailability. Biosurfactant-based micellar systems have emerged as a promising method for enhancing curcumin's efficacy. This study investigates the effect of different steroidal surfactants on curcumin's photophysical properties and its potential as a drug carrier. The results show that the surfactant's structure significantly influences curcumin's photophysics, solubility, stability, and cytotoxicity. Among the tested surfactants, CHAPS, a zwitterionic derivative of cholic acid, offers the best solubility, stability, and enhanced bioavailability for curcumin. Thus, CHAPS-based colloids hold promise as effective drug carriers for curcumin.

LANGMUIR (2023)

Article Medicine, General & Internal

Defining the role of the antineoplastic drug bleomycin based on toxicogenomic-DNA damage inducing (TGx-DDI) genomic biomarkers data: A meta-analysis using next-generation knowledge discovery method

Peter Natesan Pushparaj, Mahmood Rasool, Muhammad Imran Naseer, Kalamegam Gauthaman

Summary: In this study, bleomycin was examined for its cellular, molecular, and toxicological mechanisms using next-generation knowledge discovery (NGKD) tools. By analyzing gene expression data and using iPathwayGuide, differentially regulated signaling pathways, biological processes, cellular and molecular functions, and upstream regulators induced by bleomycin were identified.

PAKISTAN JOURNAL OF MEDICAL SCIENCES (2023)

Article Biochemistry & Molecular Biology

The temporal transcriptomic signature of cartilage formation

Roland Takacs, Judit Vago, Szilard Poliska, Peter Natesan Pushparaj, Laszlo Ducza, Patrik Kovacs, Eun-Jung Jin, Richard Barrett-Jolley, Roza Zakany, Csaba Matta

Summary: Chondrogenesis is a complex process involving the differentiation of cartilage progenitor cells. In this study, the researchers used RNA sequencing to investigate the gene expression patterns during cartilage formation in micromass cultures of embryonic limb bud-derived progenitors. They identified differentially expressed genes and confirmed their involvement in chondrogenic differentiation. Transient gene silencing experiments revealed the role of ATOH8 and EBF1 in regulating key osteochondrogenic marker genes during chondrogenesis. These findings provide a comprehensive understanding of the molecular mechanism of chondrogenesis and offer new insights for cartilage tissue engineering.

NUCLEIC ACIDS RESEARCH (2023)

Article Immunology

The clusterin connectome: Emerging players in chondrocyte biology and putative exploratory biomarkers of osteoarthritis

Patrik Kovacs, Peter Natesan Pushparaj, Roland Takacs, Ali Mobasheri, Csaba Matta

Summary: This study mapped and analyzed the network of clusterin in osteoarthritis (OA) using STRING database and Cytoscape. Results showed that the clusterin network predominantly involved intracellular chaperones, aggregate-forming proteins, apoptosis regulators, and complement proteins. Additional interacting partners, including serum proteins, apolipoproteins, and heat shock proteins, were identified. These findings contribute to the identification of potential biomarker panels for prognosis and diagnosis of OA.

FRONTIERS IN IMMUNOLOGY (2023)

Correction Oncology

Corrigendum: Human Wharton's Jelly stem cell (hWJSC) extracts inhibit ovarian cancer cell lines OVCAR3 and SKOV3 in vitro by inducing cell cycle arrest and apoptosis (vol 8, 592, 2018)

Gauthaman Kalamegam, Khalid Hussein Wali Sait, Farid Ahmed, Roaa Kadam, Peter Natesan Pushparaj, Nisreen Anfinan, Mahmood Rasool, Mohammad Sarwar Jamal, Muhammed Abu-Elmagd, Mohammed Al-Qahtani

FRONTIERS IN ONCOLOGY (2023)

Article Mathematical & Computational Biology

Leber hereditary optic neuropathy presenting as bilateral visual loss and white matter disease

Hussein Algahtani, Bader Shirah, Angham Abdulrhman Abdulkareem, Fehmida Bibi, Peter Natesan Pushparaj, Muhammad Imran Naseer

Summary: Leber hereditary optic neuropathy (LHON) is a rare mitochondrial disorder that primarily affects young male adults. It is characterized by progressive bilateral vision loss and has distinguishing features from other optic neuritis-causing diseases.

BIOINFORMATION (2023)

Article Biochemistry & Molecular Biology

Thymoquinone (TQ) Inhibits Inflammation and Migration of THP-1 Macrophages: Mechanistic Insights into the Prevention of Atherosclerosis Using In-Vitro and In-Silico Analysis

Etimad Huwait, Nouf Al-Gharawi, Maryam A. Al-Ghamdi, Mamdooh Gari, Alexandre Prola, Peter Natesan Pushparaj, Gauthaman Kalamegam

Summary: This study evaluated the effects of Thymoquinone (TQ) on key pathogenic stages of atherosclerosis and identified potential molecular targets and signaling mechanisms using in-vitro experiments and in-silico analysis. The results suggest that TQ has anti-inflammatory effects and may be a potential nutraceutical candidate for the prevention and treatment of atherosclerosis.

CURRENT ISSUES IN MOLECULAR BIOLOGY (2022)

No Data Available