Population genomic analyses reveal a highly differentiated and endangered genetic cluster of northern goshawks (Accipiter gentilis laingi ) in Haida Gwaii

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Morphologically cryptic Amazonian bird species pairs exhibit strong postzygotic reproductive isolation

(2018) Paola Pulido-Santacruz et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genome-Wide Evolutionary Analysis of Natural History and Adaptation in the World’s Tigers

(2018) Yue-Chen Liu et al.   CURRENT BIOLOGY

DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets

(2017) Julio Rozas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-wide genotyping-by-sequencing data provide a high-resolution view of wild Helianthus diversity, genetic structure, and interspecies gene flow

(2016) Gregory J. Baute et al.   AMERICAN JOURNAL OF BOTANY

Genomic variation across the Yellow-rumped Warbler species complex

(2016) David P. L. Toews et al.   AUK

Plumage Genes and Little Else Distinguish the Genomes of Hybridizing Warblers

(2016) David P.L. Toews et al.   CURRENT BIOLOGY

Direct estimate of the rate of germline mutation in a bird

(2016) Linnéa Smeds et al.   GENOME RESEARCH

Recovery of American peregrine falcons along the upper Yukon River, Alaska

(2016) Skip Ambrose et al.   JOURNAL OF WILDLIFE MANAGEMENT

Revisiting a classic case of introgression: hybridization and gene flow in Californian sunflowers

(2016) Gregory L. Owens et al.   MOLECULAR ECOLOGY

Recurrent selection explains parallel evolution of genomic regions of high relative but low absolute differentiation in a ring species

(2016) Darren E. Irwin et al.   MOLECULAR ECOLOGY

Interactions among ecosystem stressors and their importance in conservation

(2016) Isabelle M. Côté et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Establishment and Growth of the Peregrine Falcon Breeding Population Within the Mid-Atlantic Coastal Plain

(2015) Bryan D. Watts et al.   JOURNAL OF RAPTOR RESEARCH

Differentially expressed genes match bill morphology and plumage despite largely undifferentiated genomes in a Holarctic songbird

(2015) Nicholas A. Mason et al.   MOLECULAR ECOLOGY

Genetics of divergence in the Northern Saw-whet Owl (Aegolius acadicus)

(2014) Jack J. Withrow et al.   AUK

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Genomic divergence in a ring species complex

(2014) Miguel Alcaide et al.   NATURE

Phylogeography, postglacial gene flow, and population history of North American Northern Goshawks (Accipiter gentilis)

(2013) Shelley Bayard de Volo et al.   AUK

Evidence from the Genetics of Landbirds for a Forested Pleistocene Glacial Refugium in the Haida Gwaii Area

(2013) Christin L. Pruett et al.   CONDOR

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

Using Conservation Management Agreements to Secure Postrecovery Perpetuation of Conservation-Reliant Species: The Kirtland's Warbler as a Case Study

(2012) Carol I. Bocetti et al.   BIOSCIENCE

Estimating ancestry and heterozygosity of hybrids using molecular markers

(2012) Benjamin M Fitzpatrick   BMC EVOLUTIONARY BIOLOGY

Identification of metapopulation dynamics among Northern Goshawks of the Alexander Archipelago, Alaska, and Coastal British Columbia

(2012) Sarah A. Sonsthagen et al.   CONSERVATION GENETICS

Molecular markers provide insights into contemporary and historic gene flow for a non-migratory species

(2012) Brendan A. Graham et al.   JOURNAL OF AVIAN BIOLOGY

Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation

(2012) Catherine E. Wagner et al.   MOLECULAR ECOLOGY

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

A Phylogeographic and Population Genetic Analysis of a Widespread, Sedentary North American Bird: the Hairy Woodpecker (Picoides Villosus)

(2011) John Klicka et al.   AUK

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Has the Earth’s sixth mass extinction already arrived?

(2011) Anthony D. Barnosky et al.   NATURE

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Of glaciers and refugia: a decade of study sheds new light on the phylogeography of northwestern North America

(2010) AARON B. A. SHAFER et al.   MOLECULAR ECOLOGY

Chapter 3: Null Expectations in Subspecies Diagnosis

(2010) Michael A. Patten   ORNITHOLOGICAL MONOGRAPHS

Chapter 1: Subspecies Represent Geographically Partitioned Variation, A Gold Mine of Evolutionary Biology, and a Challenge for Conservation

(2010) Kevin Winker   ORNITHOLOGICAL MONOGRAPHS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Reuniting Phenotype and Genotype in Biodiversity Research

(2009) Kevin Winker   BIOSCIENCE

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Reconstructing Indian population history

(2009) David Reich et al.   NATURE

The Last Glacial Maximum

(2009) P. U. Clark et al.   SCIENCE

GENETIC PATTERNS OF DIFFERENTIATION AMONG FIVE LANDBIRD SPECIES FROM THE QUEEN CHARLOTTE ISLANDS, BRITISH COLUMBIA

(2008) CARRIE M. TOPP et al.   AUK

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

AN IMPROVED EXTRACTION METHOD TO INCREASE DNA YIELD FROM MOLTED FEATHERS

(2008) SHELLEY BAYARD DE VOLO et al.   CONDOR

Cryptic speciation in a Holarctic passerine revealed by genetic and bioacoustic analyses

(2008) DAVID P. L. TOEWS et al.   MOLECULAR ECOLOGY