dbMPIKT: a database of kinetic and thermodynamic mutant protein interactions

SKEMPI 2.0: An updated benchmark of changes in protein-protein binding energy, kinetics and thermodynamics upon mutation

(2018) Justina Jankauskaitė et al.   BIOINFORMATICS

Protein-protein interface hot spots prediction based on a hybrid feature selection strategy

(2018) Yanhua Qiao et al.   BMC BIOINFORMATICS

Prediction of Protein Hotspots from Whole Protein Sequences by a Random Projection Ensemble System

(2017) Jinjian Jiang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

DrugRPE: Random projection ensemble approach to drug-target interaction prediction

(2017) Jun Zhang et al.   NEUROCOMPUTING

Protein-protein interaction inhibitors: advances in anticancer drug design

(2016) Leonardo G. Ferreira et al.   Expert Opinion on Drug Discovery

A Sequence-Based Dynamic Ensemble Learning System for Protein Ligand-Binding Site Prediction

(2016) Peng Chen et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Solvent Accessible Surface Area-Based Hot-Spot Detection Methods for Protein–Protein and Protein–Nucleic Acid Interfaces

(2015) Cristian R. Munteanu et al.   Journal of Chemical Information and Modeling

Rational Design of Selective Small-Molecule Inhibitors for β-Catenin/B-Cell Lymphoma 9 Protein–Protein Interactions

(2015) Logan R. Hoggard et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Predicting Binding Free Energy Change Caused by Point Mutations with Knowledge-Modified MM/PBSA Method

(2015) Marharyta Petukh et al.   PLoS Computational Biology

Predicting the Effect of Mutations on Protein-Protein Binding Interactions through Structure-Based Interface Profiles

(2015) Jeffrey R. Brender et al.   PLoS Computational Biology

A New Strategy for Protein Interface Identification Using Manifold Learning Method

(2014) Bing Wang et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

Predicting the Impact of Missense Mutations on Protein–Protein Binding Affinity

(2014) Minghui Li et al.   Journal of Chemical Theory and Computation

A semi-supervised boosting SVM for predicting hot spots at protein-protein Interfaces

(2013) Bin Xu et al.   BMC Systems Biology

Druggable protein–protein interactions – from hot spots to hot segments

(2013) Nir London et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Protein-protein interactions: General trends in the relationship between binding affinity and interfacial buried surface area

(2013) Jieming Chen et al.   PROTEIN SCIENCE

Accurate prediction of hot spot residues through physicochemical characteristics of amino acid sequences

(2013) Peng Chen et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Understanding the importance of the aromatic amino-acid residues as hot-spots

(2012) I.S. Moreira et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

SKEMPI: a Structural Kinetic and Energetic database of Mutant Protein Interactions and its use in empirical models

(2012) Iain H. Moal et al.   BIOINFORMATICS

Mutational properties of amino acid residues: implications for evolvability of phosphorylatable residues

(2012) P. Creixell et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The IntAct molecular interaction database in 2012

(2011) S. Kerrien et al.   NUCLEIC ACIDS RESEARCH

Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy

(2009) Nurcan Tuncbag et al.   BIOINFORMATICS