4.6 Article

Calculating mutual information for spike trains and other data with distances but no coordinates

Journal

ROYAL SOCIETY OPEN SCIENCE
Volume 2, Issue 5, Pages -

Publisher

ROYAL SOC
DOI: 10.1098/rsos.140391

Keywords

spike trains; information theory; mutual information

Funding

  1. James S McDonnell Foundation through a Scholar Award in Cognitive Science
  2. Elisabeth Blackwell Institute

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Many important data types, such as the spike trains recorded from neurons in typical electrophysiological experiments, have a natural notion of distance or similarity between data points, even though there is no obvious coordinate system. Here, a simple Kozachenko-Leonenko estimator is derived for calculating the mutual information between datasets of this type.

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