Single-cell genomics: unravelling the genomes of unculturable microorganisms

Profiling metabolites and peptides in single cells

(2011) Stanislav S Rubakhin et al.   NATURE METHODS

Single-cell genomics

(2011) Tomer Kalisky et al.   NATURE METHODS

Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis

(2011) Paul C. Blainey et al.   PLoS One

Single-Cell Tech Primer

(2011) M. Leslie   SCIENCE

Directed Culturing of Microorganisms Using Metatranscriptomics

(2011) L. Bomar et al.   mBio

SmashCell: a software framework for the analysis of single-cell amplified genome sequences: Fig. 1.

(2010) Eoghan D. Harrington et al.   BIOINFORMATICS

Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges

(2010) Alexander Siegl et al.   ISME Journal

The role of physiological heterogeneity in microbial population behavior

(2010) Mary E Lidstrom et al.   Nature Chemical Biology

One Bacterial Cell, One Complete Genome

(2010) Tanja Woyke et al.   PLoS One

Single cell analysis: the new frontier in ‘omics’

(2010) Daojing Wang et al.   TRENDS IN BIOTECHNOLOGY

Past, present and future applications of flow cytometry in aquatic microbiology

(2010) Yingying Wang et al.   TRENDS IN BIOTECHNOLOGY

Prokaryotic whole-transcriptome analysis: deep sequencing and tiling arrays

(2010) Roland J. Siezen et al.   Microbial Biotechnology

Visual and statistical comparison of metagenomes

(2009) Suparna Mitra et al.   BIOINFORMATICS

Assembling the Marine Metagenome, One Cell at a Time

(2009) Tanja Woyke et al.   PLoS One

Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

(2009) Sébastien Rodrigue et al.   PLoS One

PKS and NRPS gene clusters from microbial symbiont cells of marine sponges by whole genome amplification

(2009) Alexander Siegl et al.   Environmental Microbiology Reports

Population Heterogeneity of Lactobacillus plantarum WCFS1 Microcolonies in Response to and Recovery from Acid Stress

(2008) C. J. Ingham et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial community gene expression in ocean surface waters

(2008) J. Frias-Lopez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA