The dual role of Amazonian rivers in the generation and maintenance of avian diversity

Systematics and biogeography of the Automolus infuscatus complex (Aves; Furnariidae): Cryptic diversity reveals western Amazonia as the origin of a transcontinental radiation

(2017) Eduardo D. Schultz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Tracing the peopling of the world through genomics

(2017) Rasmus Nielsen et al.   NATURE

Hydroclimate changes across the Amazon lowlands over the past 45,000 years

(2017) Xianfeng Wang et al.   NATURE

The role of tectonics and climate in the late Quaternary evolution of a northern Amazonian River

(2016) Édipo Henrique Cremon et al.   GEOMORPHOLOGY

Molecular systematics of the new world screech-owls ( Megascops : Aves, Strigidae): biogeographic and taxonomic implications

(2016) Sidnei M. Dantas et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Hybridization in headwater regions, and the role of rivers as drivers of speciation in Amazonian birds

(2015) Jason T. Weir et al.   EVOLUTION

The trans-riverine genetic structure of 28 Amazonian frog species is dependent on life history

(2015) Antoine Fouquet et al.   JOURNAL OF TROPICAL ECOLOGY

Molecular phylogeny and diversification of a widespread Neotropical rainforest bird group: The Buff-throated Woodcreeper complex, Xiphorhynchus guttatus/susurrans (Aves: Dendrocolaptidae)

(2015) Tainá C. Rocha et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genomic variation in a widespread Neotropical bird (Xenops minutus) reveals divergence, population expansion, and gene flow

(2015) Michael G. Harvey et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Spatial and temporal patterns of diversification on the Amazon: A test of the riverine hypothesis for all diurnal primates of Rio Negro and Rio Branco in Brazil

(2015) Jean P. Boubli et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeography unplugged: comparative surveys in the genomic era

(2014) Brian W Bowen et al.   BULLETIN OF MARINE SCIENCE

Molecular Phylogenetics and the Diversification of Hummingbirds

(2014) Jimmy A. McGuire et al.   CURRENT BIOLOGY

Multiple speciation across the Andes and throughout Amazonia: the case of the spot-backed antbird species complex (Hylophylax naevius/Hylophylax naevioides)

(2014) Alexandre M. Fernandes et al.   JOURNAL OF BIOGEOGRAPHY

The drivers of tropical speciation

(2014) Brian Tilston Smith et al.   NATURE

MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity

(2013) Wen Huang et al.   BMC BIOINFORMATICS

Cryptic patterns of diversification of a widespread Amazonian Woodcreeper species complex (Aves: Dendrocolaptidae) inferred from multilocus phylogenetic analysis: Implications for historical biogeography and taxonomy

(2013) Tiago Sousa-Neves et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Biogeography and spatio-temporal diversification of Selenidera and Andigena Toucans (Aves: Ramphastidae)

(2013) Holly L. Lutz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

River barriers and cryptic biodiversity in an evolutionary museum

(2013) G. Voelker et al.   Ecology and Evolution

The Role of Physical Barriers in the Location of Avian Suture Zones in the Guiana Shield, Northern Amazonia

(2012) Luciano Nicolas Naka et al.   AMERICAN NATURALIST

Phylogeny and comparative phylogeography ofSclerurus(Aves: Furnariidae) reveal constant and cryptic diversification in an old radiation of rain forest understorey specialists

(2012) Fernando M. d’Horta et al.   JOURNAL OF BIOGEOGRAPHY

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Multilocus phylogeography of the Wedge-billed Woodcreeper Glyphorynchus spirurus (Aves, Furnariidae) in lowland Amazonia: Widespread cryptic diversity and paraphyly reveal a complex diversification pattern

(2012) Alexandre M. Fernandes et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Andean uplift promotes lowland speciation through vicariance and dispersal in Dendrocincla woodcreepers

(2011) JASON T. WEIR et al.   MOLECULAR ECOLOGY

Molecular phylogenetics, vocalizations, and species limits in Celeus woodpeckers (Aves: Picidae)

(2011) Brett W. Benz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years

(2011) C. C. Ribas et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Neotropical biodiversity: timing and potential drivers

(2011) Valentí Rull   TRENDS IN ECOLOGY & EVOLUTION

A Classification of Major Naturally-Occurring Amazonian Lowland Wetlands

(2011) Wolfgang J. Junk et al.   WETLANDS

Variation partitioning as a tool to distinguish between niche and neutral processes

(2010) Tyler W. Smith et al.   ECOGRAPHY

The roles of rivers and Pleistocene refugia in shaping genetic diversity in Praomys misonnei in tropical Africa

(2010) V. Nicolas et al.   JOURNAL OF BIOGEOGRAPHY

Avian distribution patterns in the Guiana Shield: implications for the delimitation of Amazonian areas of endemism

(2010) Luciano Nicolás Naka   JOURNAL OF BIOGEOGRAPHY

Temporal and spatial diversification of Pteroglossus araçaris (AVES: Ramphastidae) in the neotropics: Constant rate of diversification does not support an increase in radiation during the Pleistocene

(2010) Swati Patel et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Hypotheses to explain the origin of species in Amazonia

(2009) J. Haffer   BRAZILIAN JOURNAL OF BIOLOGY

THE COMBINED EFFECTS OF RIVERS AND REFUGIA GENERATE EXTREME CRYPTIC FRAGMENTATION WITHIN THE COMMON GROUND SKINK (SCINCELLA LATERALIS)

(2009) Nathan D. Jackson et al.   EVOLUTION

Phylogenetic relationships, diversification and biogeography in NeotropicalBrotogerisparakeets

(2009) Camila C. Ribas et al.   JOURNAL OF BIOGEOGRAPHY

Evolutionary history of Ramphastos toucans: Molecular phylogenetics, temporal diversification, and biogeography

(2009) José S.L. Patané et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitochondrial DNA under siege in avian phylogeography

(2008) ROBERT M. ZINK et al.   MOLECULAR ECOLOGY

Calibrating the avian molecular clock

(2008) J. T. WEIR et al.   MOLECULAR ECOLOGY

Out of Amazonia again and again: episodic crossing of the Andes promotes diversification in a lowland forest flycatcher

(2008) M. J Miller et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Comment on "The Latitudinal Gradient in Recent Speciation and Extinction Rates of Birds and Mammals"

(2008) Joseph A. Tobias et al.   SCIENCE