Comparative genomic data of the Avian Phylogenomics Project

Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment

(2014) Cai Li et al.   GigaScience

High-coverage sequencing and annotated assemblies of the budgerigar genome

(2014) Ganeshkumar Ganapathy et al.   GigaScience

Peregrine and saker falcon genome sequences provide insights into evolution of a predatory lifestyle

(2013) Xiangjiang Zhan et al.   NATURE GENETICS

The duck genome and transcriptome provide insight into an avian influenza virus reservoir species

(2013) Yinhua Huang et al.   NATURE GENETICS

Genomic Diversity and Evolution of the Head Crest in the Rock Pigeon

(2013) M. D. Shapiro et al.   SCIENCE

Ensembl 2012

(2011) P. Flicek et al.   NUCLEIC ACIDS RESEARCH

SATé-II: Very Fast and Accurate Simultaneous Estimation of Multiple Sequence Alignments and Phylogenetic Trees

(2011) Kevin Liu et al.   SYSTEMATIC BIOLOGY

PHAST and RPHAST: phylogenetic analysis with space/time models

(2010) M. J. Hubisz et al.   BRIEFINGS IN BIOINFORMATICS

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH