Structure-based function analysis of putative conserved proteins with isomerase activity from Haemophilus influenzae

Functional annotation of putative hypothetical proteins from Candida dubliniensis

(2014) Kundan Kumar et al.   GENE

Interaction between Basic 7S Globulin and Leginsulin in Soybean [Glycine max]: A Structural Insight

(2014) Amandeep Singh et al.   Letters in Drug Design & Discovery

Structural Characterization, Homology Modeling and Docking Studies of ARG674 Mutation in MyH8 Gene Associated with Trismus-Pseudocamptodactyly Syndrome

(2014) Munazzah Tasleem et al.   Letters in Drug Design & Discovery

Structure Based Functional Annotation of Putative Conserved Proteins from Treponema pallidum: Search for a Potential Drug Target

(2014) Avni Sinha et al.   Letters in Drug Design & Discovery

Identification of Interfacial Residues Involved in Hepcidin-Ferroportin Interaction

(2014) Prasoon Thakur et al.   Letters in Drug Design & Discovery

Functional Annotation of Conserved Hypothetical Proteins from Haemophilus influenzae Rd KW20

(2014) Mohd Shahbaaz et al.   PLoS One

Protein–ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment

(2013) Jianyi Yang et al.   BIOINFORMATICS

The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs

(2013) Nadine Czudnochowski et al.   NUCLEIC ACIDS RESEARCH

High Resolution Crystal Structure of Human β-Glucuronidase Reveals Structural Basis of Lysosome Targeting

(2013) Md. Imtaiyaz Hassan et al.   PLoS One

Synthesis and dissolution of hemicatenanes by type IA DNA topoisomerases

(2013) S.-H. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Involvement of Peptidylprolylcis/transIsomerases in Enterococcus faecalis Virulence

(2012) Fany Reffuveille et al.   INFECTION AND IMMUNITY

Emergence of a Multidrug-Resistant Haemophilus influenzae Strain Causing Chronic Pneumonia in a Patient with Common Variable Immunodeficiency

(2012) Yvonne Pfeifer et al.   Microbial Drug Resistance

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

(2012) Ian Sillitoe et al.   NUCLEIC ACIDS RESEARCH

COFACTOR: an accurate comparative algorithm for structure-based protein function annotation

(2012) Ambrish Roy et al.   NUCLEIC ACIDS RESEARCH

ProtoNet 6.0: organizing 10 million protein sequences in a compact hierarchical family tree

(2011) N. Rappoport et al.   NUCLEIC ACIDS RESEARCH

firestar —advances in the prediction of functionally important residues

(2011) Gonzalo Lopez et al.   NUCLEIC ACIDS RESEARCH

OPM database and PPM web server: resources for positioning of proteins in membranes

(2011) Mikhail A. Lomize et al.   NUCLEIC ACIDS RESEARCH

SMART 7: recent updates to the protein domain annotation resource

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes

(2010) Nancy Y. Yu et al.   BIOINFORMATICS

I-TASSER: a unified platform for automated protein structure and function prediction

(2010) Ambrish Roy et al.   Nature Protocols

3DLigandSite: predicting ligand-binding sites using similar structures

(2010) Mark N. Wass et al.   NUCLEIC ACIDS RESEARCH

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Roll: a new algorithm for the detection of protein pockets and cavities with a rolling probe sphere

(2009) Jian Yu et al.   BIOINFORMATICS

CHARMM: The biomolecular simulation program

(2009) B. R. Brooks et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Direct Detection of the Multidrug Resistance Genome of Haemophilus influenzae in Cerebrospinal Fluid of Children

(2009) Samir K. Saha et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL

Improved prediction of protein side-chain conformations with SCWRL4

(2009) Georgii G. Krivov et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Structure is three to ten times more conserved than sequence-A study of structural response in protein cores

(2009) Kristoffer Illergård et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

VirulentPred: a SVM based prediction method for virulent proteins in bacterial pathogens

(2008) Aarti Garg et al.   BMC BIOINFORMATICS

The Radical SAM Superfamily

(2008) Perry A. Frey et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Crystal Structure of the Novel Complex Formed between Zinc α2-Glycoprotein (ZAG) and Prolactin-Inducible Protein (PIP) from Human Seminal Plasma

(2008) Md. Imtaiyaz Hassan et al.   JOURNAL OF MOLECULAR BIOLOGY