Taxonomic and functional profiles of soil samples from Atlantic forest and Caatinga biomes in northeastern Brazil

Computational meta'omics for microbial community studies

(2013) N. Segata et al.   Molecular Systems Biology

Taxonomic Precision of Different Hypervariable Regions of 16S rRNA Gene and Annotation Methods for Functional Bacterial Groups in Biological Wastewater Treatment

(2013) Feng Guo et al.   PLoS One

Bacterial community structure in the rhizosphere of three cactus species from semi-arid highlands in central Mexico

(2012) J. Félix Aguirre-Garrido et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Significant Role for Microbial Autotrophy in the Sequestration of Soil Carbon

(2012) Hongzhao Yuan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogeochemical cycling in terrestrial ecosystems of the Caatinga Biome

(2012) RSC Menezes et al.   BRAZILIAN JOURNAL OF BIOLOGY

Succession of N cycling processes in biological soil crusts on a Central European inland dune

(2012) Robert Brankatschk et al.   FEMS MICROBIOLOGY ECOLOGY

Characterization of Soil Bacterial Assemblies in Brazilian Savanna-Like Vegetation Reveals Acidobacteria Dominance

(2012) Janaina F. Araujo et al.   MICROBIAL ECOLOGY

Denitrification and N2O:N2 production in temperate grasslands: Processes, measurements, modelling and mitigating negative impacts

(2012) Surinder Saggar et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bacterial community structure of contrasting soils underlying Bornean rain forests: Inferences from microarray and next-generation sequencing methods

(2012) Sabrina E. Russo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Identity and relationships of the Arboreal Caatinga among other floristic units of seasonally dry tropical forests (SDTFs) of north-eastern and Central Brazil

(2012) Rubens M. Santos et al.   Ecology and Evolution

Aspergillus flavus

(2011) Saori Amaike et al.   Annual Review of Phytopathology

Emerging complexity in the denitrification regulatory network ofBradyrhizobium japonicum

(2011) María J. Torres et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Comparison of Bacterial and Fungal Communities Between Natural and Planted Pine Forests in Subtropical China

(2011) Ming Nie et al.   CURRENT MICROBIOLOGY

The Effect of Soil Texture on Richness and Diversity of Bacterial Communities

(2011) Jessica Furrer Chau et al.   ENVIRONMENTAL FORENSICS

The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Soil characteristics more strongly influence soil bacterial communities than land-use type

(2011) Eiko E. Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

The Effect of Resource Islands on Abundance and Diversity of Bacteria in Arid Soils

(2011) Ami Bachar et al.   MICROBIAL ECOLOGY

Distinctive Phyllosphere Bacterial Communities in Tropical Trees

(2011) Mincheol Kim et al.   MICROBIAL ECOLOGY

Non-CO2 greenhouse gases and climate change

(2011) S. A. Montzka et al.   NATURE

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Soil Microorganisms Mediating Phosphorus Availability Update on Microbial Phosphorus

(2011) A. E. Richardson et al.   PLANT PHYSIOLOGY

Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil

(2011) Kristen M. DeAngelis et al.   PLoS One

Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats

(2011) Thomas C. Jeffries et al.   PLoS One

Desert Farming Benefits from Microbial Potential in Arid Soils and Promotes Diversity and Plant Health

(2011) Martina Köberl et al.   PLoS One

Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada

(2011) Beth F.T. Brockett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Stocks of carbon and nitrogen and partitioning between above- and belowground pools in the Brazilian coastal Atlantic Forest elevation range

(2011) Simone A. Vieira et al.   Ecology and Evolution

Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance

(2011) Katherine C. Goldfarb et al.   Frontiers in Microbiology

Monitoring of microbial hydrocarbon remediation in the soil

(2011) Chioma Blaise Chikere et al.   3 Biotech

Influence of Soil Characteristics on the Diversity of Bacteria in the Southern Brazilian Atlantic Forest

(2010) H. Faoro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

Experimental drought in a tropical rain forest increases soil carbon dioxide losses to the atmosphere

(2010) Cory C. Cleveland et al.   ECOLOGY

Bacterial gene abundances as indicators of greenhouse gas emission in soils

(2010) Sergio E Morales et al.   ISME Journal

Bacterial Community Diversity in the Brazilian Atlantic Forest Soils

(2010) Thiago Bruce et al.   MICROBIAL ECOLOGY

Soil Microbial Abundance and Diversity Along a Low Precipitation Gradient

(2010) Ami Bachar et al.   MICROBIAL ECOLOGY

Exploring research frontiers in microbiology: the challenge of metagenomics in soil microbiology

(2010) Stefano Mocali et al.   RESEARCH IN MICROBIOLOGY

Potential of Caatinga forage plants in ruminant feeding

(2010) Mércia Virginia Ferreira dos Santos et al.   REVISTA BRASILEIRA DE ZOOTECNIA-BRAZILIAN JOURNAL OF ANIMAL SCIENCE

A phylogenetic microarray targeting 16S rRNA genes from the bacterial division Acidobacteria reveals a lineage-specific distribution in a soil clay fraction

(2010) Mark R. Liles et al.   SOIL BIOLOGY & BIOCHEMISTRY

Complete genome sequence of Geodermatophilus obscurus type strain (G-20T)

(2010) Natalia Ivanova et al.   Standards in Genomic Sciences

Are the vegetation structure and composition of the shrubby Caatinga free from edge influence?

(2009) André Maurício de Melo Santos et al.   Acta Botanica Brasilica

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Visual and statistical comparison of metagenomes

(2009) Suparna Mitra et al.   BIOINFORMATICS

Genomics of an extreme psychrophile, Psychromonas ingrahamii

(2009) Monica Riley et al.   BMC GENOMICS

Aerobic methanol-oxidizingBacteria in soil

(2009) Steffen Kolb   FEMS MICROBIOLOGY LETTERS

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

(2009) Ryan T Jones et al.   ISME Journal

Systematic artifacts in metagenomes from complex microbial communities

(2009) Vicente Gomez-Alvarez et al.   ISME Journal

Changes in land use alter the structure of bacterial communities in Western Amazon soils

(2009) Ederson da C Jesus et al.   ISME Journal

Photochemically induced carbon dioxide production as a mechanism for carbon loss from plant litter in arid ecosystems

(2009) L. A. Brandt et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Bacterial Community Diversity in Undisturbed Perhumid Montane Forest Soils in Taiwan

(2009) Yu-Te Lin et al.   MICROBIAL ECOLOGY

Vegetation Affects the Relative Abundances of Dominant Soil Bacterial Taxa and Soil Respiration Rates in an Upland Grassland Soil

(2009) Bruce C. Thomson et al.   MICROBIAL ECOLOGY

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

(2009) H. J. Di et al.   Nature Geoscience

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

Nitrogen balance in forest soils: nutritional limitation of plants under climate change stresses

(2009) H. Rennenberg et al.   PLANT BIOLOGY

Photoacceleration of plant litter decomposition in an arid environment

(2009) Marcy E. Gallo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter

(2008) S. R. Starkenburg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Comment on "A 3-Hydroxypropionate/4-Hydroxybutyrate Autotrophic Carbon Dioxide Assimilation Pathway in Archaea"

(2008) T. J. G. Ettema et al.   SCIENCE