VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data
Authors
Keywords
Metagenomics, Machine learning, Visualization, Binning
Journal
Microbiome
Volume 3, Issue 1, Pages 1
Publisher
Springer Nature
Online
2015-01-19
DOI
10.1186/s40168-014-0066-1
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
- (2014) H Bjørn Nielsen et al. NATURE BIOTECHNOLOGY
- Tackling soil diversity with the assembly of large, complex metagenomes
- (2014) Adina Chuang Howe et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Alignment-free Visualization of Metagenomic Data by Nonlinear Dimension Reduction
- (2014) Cedric C. Laczny et al. Scientific Reports
- Kraken: ultrafast metagenomic sequence classification using exact alignments
- (2014) Derrick E Wood et al. GENOME BIOLOGY
- GroopM: an automated tool for the recovery of population genomes from related metagenomes
- (2014) Michael Imelfort et al. PeerJ
- MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
- (2014) Yu-Wei Wu et al. Microbiome
- Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
- (2013) Mads Albertsen et al. NATURE BIOTECHNOLOGY
- Metagenomic species profiling using universal phylogenetic marker genes
- (2013) Shinichi Sunagawa et al. NATURE METHODS
- Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla
- (2012) K. C. Wrighton et al. SCIENCE
- The Binning of Metagenomic Contigs for Microbial Physiology of Mixed Cultures
- (2012) Marc Strous et al. Frontiers in Microbiology
- Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
- (2011) Chris L Dupont et al. ISME Journal
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Community-wide analysis of microbial genome sequence signatures
- (2009) Gregory J Dick et al. GENOME BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started