The Relevance ofHLASequencing in Population Genetics Studies

A New HLA Map of Europe: Regional Genetic Variation and Its Implication for Peopling History, Disease-Association Studies and Tissue Transplantation

(2014) Alicia Sanchez-Mazas et al.   HUMAN HEREDITY

HLA-A, -B, -C, -DRB1 and -DQB1 allele and haplotype frequencies in Saudis using next generation sequencing technique

(2014) A. H. Hajeer et al.   TISSUE ANTIGENS

HLA typing by next-generation sequencing - getting closer to reality

(2014) C. Gabriel et al.   TISSUE ANTIGENS

Evaluation of HLA-DRB1 imputation using a Finnish dataset

(2014) E. Vlachopoulou et al.   TISSUE ANTIGENS

Identification of 2127 new HLA class I alleles in potential stem cell donors from Germany, the United States and Poland

(2014) C. J. Hernández-Frederick et al.   TISSUE ANTIGENS

TheHLA-net GENE[RATE]pipeline for effective HLA data analysis and its application to 145 population samples from Europe and neighbouring areas

(2014) J. M. Nunes et al.   TISSUE ANTIGENS

Major Histocompatibility Complex Genomics and Human Disease

(2013) John Trowsdale et al.   Annual Review of Genomics and Human Genetics

Worldwide genetic variation at the 3′ untranslated region of the HLA-G gene: balancing selection influencing genetic diversity

(2013) A Sabbagh et al.   GENES AND IMMUNITY

Current perspectives on the intensity of natural selection of MHC loci

(2013) Yoshiki Yasukochi et al.   IMMUNOGENETICS

Variants at multiple loci implicated in both innate and adaptive immune responses are associated with Sjögren's syndrome

(2013) Christopher J Lessard et al.   NATURE GENETICS

Genome-wide association analysis identifies 13 new risk loci for schizophrenia

(2013) Stephan Ripke et al.   NATURE GENETICS

HIBAG—HLA genotype imputation with attribute bagging

(2013) X Zheng et al.   PHARMACOGENOMICS JOURNAL

HLA Typing from 1000 Genomes Whole Genome and Whole Exome Illumina Data

(2013) Endre Major et al.   PLoS One

Multiple Instances of Ancient Balancing Selection Shared Between Humans and Chimpanzees

(2013) E. M. Leffler et al.   SCIENCE

Common and well-documented HLA alleles: 2012 update to the CWD catalogue

(2013) S. J. Mack et al.   TISSUE ANTIGENS

A Brief Review on the Human Encyclopedia of DNA Elements (ENCODE) Project

(2013) Hongzhu Qu et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Filling the gaps – The generation of full genomic sequences for 15 common and well-documented HLA class I alleles using next-generation sequencing technology

(2012) C. Lind et al.   HUMAN IMMUNOLOGY

16thIHIW: Analysis of HLA Population Data, with updated results for 1996 to 2012 workshop data (AHPD project report)

(2012) M. E. Riccio et al.   International Journal of Immunogenetics

Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis

(2012) Soumya Raychaudhuri et al.   NATURE GENETICS

The IMGT/HLA database

(2012) James Robinson et al.   NUCLEIC ACIDS RESEARCH

Tracking human migrations by the analysis of the distribution of HLA alleles, lineages and haplotypes in closed and open populations

(2012) M. A. F. Vina et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

New reservoirs of HLA alleles: pools of rare variants enhance immune defense

(2012) William Klitz et al.   TRENDS IN GENETICS

HLA typing from RNA-Seq sequence reads

(2012) Sebastian Boegel et al.   Genome Medicine

Perspectives on Human Population Structure at the Cusp of the Sequencing Era

(2011) John Novembre et al.   Annual Review of Genomics and Human Genetics

HLA*IMP—an integrated framework for imputing classical HLA alleles from SNP genotypes

(2011) Alexander T. Dilthey et al.   BIOINFORMATICS

Next-generation sequencing for HLA typing of class I loci

(2011) Rachel L Erlich et al.   BMC GENOMICS

Pervasive haplotypic variation in the spliceo-transcriptome of the human major histocompatibility complex

(2011) C. Vandiedonck et al.   GENOME RESEARCH

Allele Frequency Estimation from Ambiguous Data: Using Resampling Schema in Validating Frequency Estimates and in Selective Neutrality Testing

(2011) José Manuel Nunes et al.   HUMAN BIOLOGY

The CWD allele catalog in China

(2011) Pedro Cano et al.   HUMAN IMMUNOLOGY

Common and well-documented (CWD) alleles of human leukocyte antigen-A, -B, -C, -DRB1, and -DQB1 loci for the Chinese Han population do not quite correlate with the ASHI CWD alleles

(2011) Jun He et al.   HUMAN IMMUNOLOGY

Immunogenetics as a tool in anthropological studies

(2011) Alicia Sanchez-Mazas et al.   IMMUNOLOGY

HLA DNA Sequence Variation among Human Populations: Molecular Signatures of Demographic and Selective Events

(2011) Stéphane Buhler et al.   PLoS One

Demographic history and rare allele sharing among human populations

(2011) S. Gravel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Human genetic differentiation across the Strait of Gibraltar

(2010) Mathias Currat et al.   BMC EVOLUTIONARY BIOLOGY

Genomics: In search of rare human variants

(2010) Rasmus Nielsen   NATURE

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci

(2010) Eli A Stahl et al.   NATURE GENETICS

Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations

(2010) F. F. Gonzalez-Galarza et al.   NUCLEIC ACIDS RESEARCH

Analysis of the HLA population data (AHPD) submitted to the 15th International Histocompatibility/Immunogenetics Workshop by using the Gene[rate] computer tools accommodating ambiguous data (ahpd project report)

(2010) J. M. Nunes et al.   TISSUE ANTIGENS

Candidate Causal Regulatory Effects by Integration of Expression QTLs with Complex Trait Genetic Associations

(2010) Alexandra C. Nica et al.   PLoS Genetics

Efficient Approximate Bayesian Computation Coupled With Markov Chain Monte Carlo Without Likelihood

(2009) Daniel Wegmann et al.   GENETICS

Darwinian and demographic forces affecting human protein coding genes

(2009) R. Nielsen et al.   GENOME RESEARCH

The HLA genomic loci map: expression, interaction, diversity and disease

(2009) Takashi Shiina et al.   JOURNAL OF HUMAN GENETICS

A Statistical Method for Predicting Classical HLA Alleles from SNP Data

(2008) Stephen Leslie et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies

(2008) Owen D. Solberg et al.   HUMAN IMMUNOLOGY

Genotype, haplotype and copy-number variation in worldwide human populations

(2008) Mattias Jakobsson et al.   NATURE