Identification and replication of RNA-Seq gene network modules associated with depression severity
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Title
Identification and replication of RNA-Seq gene network modules associated with depression severity
Authors
Keywords
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Journal
Translational Psychiatry
Volume 8, Issue 1, Pages -
Publisher
Springer Nature America, Inc
Online
2018-09-06
DOI
10.1038/s41398-018-0234-3
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Note: Only part of the references are listed.- An interaction quantitative trait loci tool implicates epistatic functional variants in an apoptosis pathway in smallpox vaccine eQTL data
- (2016) C A Lareau et al. GENES AND IMMUNITY
- FKBP5 polymorphisms moderate the influence of adverse life events on the risk of anxiety and depressive disorders in preschool children
- (2016) Sandra Scheuer et al. JOURNAL OF PSYCHIATRIC RESEARCH
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- (2016) Craig L Hyde et al. NATURE GENETICS
- GeneAnalytics: An Integrative Gene Set Analysis Tool for Next Generation Sequencing, RNAseq and Microarray Data
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- Recursive Indirect-Paths Modularity (RIP-M) for Detecting Community Structure in RNA-Seq Co-expression Networks
- (2016) Bahareh Rahmani et al. Frontiers in Genetics
- Association of the VRK2 gene rs3732136 polymorphism with schizophrenia in a Northwest Chinese Han population
- (2015) B. Zhang et al. GENETICS AND MOLECULAR RESEARCH
- FAS -670A>G genetic polymorphism Is associated with Treatment Resistant Depression
- (2015) Marlene Santos et al. JOURNAL OF AFFECTIVE DISORDERS
- Erratum: Gene expression in major depressive disorder
- (2015) R Jansen et al. MOLECULAR PSYCHIATRY
- Erratum: Corrigendum: Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways
- (2015) NATURE NEUROSCIENCE
- Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways
- (2015) NATURE NEUROSCIENCE
- limma powers differential expression analyses for RNA-sequencing and microarray studies
- (2015) Matthew E. Ritchie et al. NUCLEIC ACIDS RESEARCH
- Genetic Studies of Major Depressive Disorder: Why Are There No Genome-wide Association Study Findings and What Can We Do About It?
- (2014) Douglas F. Levinson et al. BIOLOGICAL PSYCHIATRY
- Reconstruction of gene co-expression network from microarray data using local expression patterns
- (2014) Swarup Roy et al. BMC BIOINFORMATICS
- Effect of OPRM1 and stressful life events on symptoms of major depression in African American adolescents
- (2014) Gregory Swann et al. JOURNAL OF AFFECTIVE DISORDERS
- The organization of the stress system and its dysregulation in depressive illness
- (2014) P W Gold MOLECULAR PSYCHIATRY
- CellMix: a comprehensive toolbox for gene expression deconvolution
- (2013) R. Gaujoux et al. BIOINFORMATICS
- GSVA: gene set variation analysis for microarray and RNA-Seq data
- (2013) Sonja Hänzelmann et al. BMC BIOINFORMATICS
- Beyond modules and hubs: the potential of gene coexpression networks for investigating molecular mechanisms of complex brain disorders
- (2013) C. Gaiteri et al. GENES BRAIN AND BEHAVIOR
- Smoke-related DNA methylation changes in the etiology of human disease
- (2013) Welisane Besingi et al. HUMAN MOLECULAR GENETICS
- Genetic variant ofAKT1andAKTIPassociated with late-onset depression in a Brazilian population
- (2013) Patricia Araújo Pereira et al. INTERNATIONAL JOURNAL OF GERIATRIC PSYCHIATRY
- Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing
- (2013) S Mostafavi et al. MOLECULAR PSYCHIATRY
- FKBP5 genetic variation
- (2013) Katarzyna A. Ellsworth et al. Pharmacogenetics and Genomics
- When Is Hub Gene Selection Better than Standard Meta-Analysis?
- (2013) Peter Langfelder et al. PLoS One
- ReliefSeq: A Gene-Wise Adaptive-K Nearest-Neighbor Feature Selection Tool for Finding Gene-Gene Interactions and Main Effects in mRNA-Seq Gene Expression Data
- (2013) Brett A. McKinney et al. PLoS One
- Removing technical variability in RNA-seq data using conditional quantile normalization
- (2012) K. D. Hansen et al. BIOSTATISTICS
- Two gene co-expression modules differentiate psychotics and controls
- (2012) C Chen et al. MOLECULAR PSYCHIATRY
- Meta-analysis and brain imaging data support the involvement of VRK2 (rs2312147) in schizophrenia susceptibility
- (2012) Ming Li et al. SCHIZOPHRENIA RESEARCH
- Human diseases through the lens of network biology
- (2012) Laura I. Furlong TRENDS IN GENETICS
- RNA-seq: technical variability and sampling
- (2011) Lauren M McIntyre et al. BMC GENOMICS
- Transcriptomic analysis of autistic brain reveals convergent molecular pathology
- (2011) Irina Voineagu et al. NATURE
- Association of Mu-Opioid Receptor Variants and Response to Citalopram Treatment in Major Depressive Disorder
- (2010) Holly A. Garriock et al. AMERICAN JOURNAL OF PSYCHIATRY
- Coexpression network analysis of neural tissue reveals perturbations in developmental processes in schizophrenia
- (2010) A. Torkamani et al. GENOME RESEARCH
- Variations in FKBP5 and BDNF genes are suggestively associated with depression in a Swedish population-based cohort
- (2010) Catharina Lavebratt et al. JOURNAL OF AFFECTIVE DISORDERS
- A preliminary investigation of the influence of CREB1 gene on treatment resistance in major depression
- (2010) Alessandro Serretti et al. JOURNAL OF AFFECTIVE DISORDERS
- Identification of a gene module associated with BMD through the integration of network analysis and genome-wide association data
- (2010) Charles R Farber JOURNAL OF BONE AND MINERAL RESEARCH
- Analysing biological pathways in genome-wide association studies
- (2010) Kai Wang et al. NATURE REVIEWS GENETICS
- Pathway-based approaches to imaging genetics association studies: Wnt signaling, GSK3beta substrates and major depression
- (2010) Becky Inkster et al. NEUROIMAGE
- Modulation of glucocorticoid receptor nuclear translocation in neurons by immunophilins FKBP51 and FKBP52: Implications for major depressive disorder
- (2009) Erick T. Tatro et al. BRAIN RESEARCH
- Altered expression of CD4+CD25+ regulatory T cells and its 5-HT1a receptor in patients with major depression disorder
- (2009) Yi Li et al. JOURNAL OF AFFECTIVE DISORDERS
- Differential Expression of Immunophilins FKBP51 and FKBP52 in the Frontal Cortex of HIV-Infected Patients with Major Depressive Disorder
- (2009) Erick T. Tatro et al. Journal of Neuroimmune Pharmacology
- Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1
- (2009) David A. Barbie et al. NATURE
- Genome-wide association study identifies common variants at four loci as genetic risk factors for Parkinson's disease
- (2009) Wataru Satake et al. NATURE GENETICS
- A Discriminating Messenger RNA Signature for Bipolar Disorder Formed by an Aberrant Expression of Inflammatory Genes in Monocytes
- (2008) Roos C. Padmos et al. ARCHIVES OF GENERAL PSYCHIATRY
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
- Gene module level analysis: identification to networks and dynamics
- (2008) Xuewei Wang et al. CURRENT OPINION IN BIOTECHNOLOGY
- A Systems Level Analysis of Transcriptional Changes in Alzheimer's Disease and Normal Aging
- (2008) J. A. Miller et al. JOURNAL OF NEUROSCIENCE
- Gene Expression Signature of Cigarette Smoking and Its Role in Lung Adenocarcinoma Development and Survival
- (2008) Maria Teresa Landi et al. PLoS One
- Role of the Akt pathway in mRNA translation of interferon-stimulated genes
- (2008) S. Kaur et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Accelerated apoptosis of blood leukocytes and oxidative stress in blood of patients with major depression
- (2007) Agnieszka Szuster-Ciesielska et al. PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY
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