FUNCTIONAL CLASSIFICATION OF PROTEIN 3D STRUCTURES FROM PREDICTED LOCAL INTERACTION SITES

Partial Order Optimum Likelihood (POOL): Maximum Likelihood Prediction of Protein Active Site Residues Using 3D Structure and Sequence Properties

(2009) Wenxu Tong et al.   PLoS Computational Biology

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

(2009) Alexandra M. Schnoes et al.   PLoS Computational Biology

Identification of Residues in DmsD for Twin-Arginine Leader Peptide Binding, Defined through Random and Bioinformatics-Directed Mutagenesis†

(2008) Catherine S. Chan et al.   BIOCHEMISTRY

INTREPID—INformation-theoretic TREe traversal for Protein functional site IDentification

(2008) Sriram Sankararaman et al.   BIOINFORMATICS

Prediction of interaction sites from apo 3D structures when the holo conformation is different

(2008) Leonel F. Murga et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Enhanced performance in prediction of protein active sites with THEMATICS and support vector machines

(2007) Wenxu Tong et al.   PROTEIN SCIENCE