A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assessing and Improving Methods Used in Operational Taxonomic Unit-Based Approaches for 16S rRNA Gene Sequence Analysis

(2011) Patrick D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences

(2011) Bo Liu et al.   BMC GENOMICS

Clinical pleiomorphism in human leishmaniases, with special mention of asymptomatic infection

(2011) A.L. Bañuls et al.   CLINICAL MICROBIOLOGY AND INFECTION

Severe Asthma with Fungal Sensitization

(2011) Ritesh Agarwal   CURRENT ALLERGY AND ASTHMA REPORTS

Trichomoniasis: evaluation to execution

(2011) Djana F. Harp et al.   European Journal of Obstetrics & Gynecology and Reproductive Biology

Host parasite interactions and pathophysiology in Giardia infections

(2011) James A. Cotton et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Host–pathogen interactions and virulence-associated genes during Candida albicans oral infections

(2011) Ronny Martin et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Candida Colonization Index in Patients Admitted to an ICU

(2011) Giuseppina Caggiano et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

BOARD-INVITED REVIEW: St. Anthony's Fire in livestock: Causes, mechanisms, and potential solutions1,2

(2011) J. R. Strickland et al.   JOURNAL OF ANIMAL SCIENCE

Gene prediction with Glimmer for metagenomic sequences augmented by classification and clustering

(2011) David R. Kelley et al.   NUCLEIC ACIDS RESEARCH

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Cryptococcus gattii: a resurgent fungal pathogen

(2011) Vishnu Chaturvedi et al.   TRENDS IN MICROBIOLOGY

Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags

(2010) Gary D Wu et al.   BMC MICROBIOLOGY

Phylogenetic diversity and community structure of anaerobic gut fungi (phylum Neocallimastigomycota) in ruminant and non-ruminant herbivores

(2010) Audra S Liggenstoffer et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Phylogeny and Evolution of Apusomonadida (Protozoa: Apusozoa): New Genera and Species

(2010) Thomas Cavalier-Smith et al.   PROTIST

Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals

(2010) Mahmoud A. Ghannoum et al.   PLoS Pathogens

Metagenomic analyses reveal antibiotic-induced temporal and spatial changes in intestinal microbiota with associated alterations in immune cell homeostasis

(2009) D A Hill et al.   Mucosal Immunology

High Prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae Detected in the Human Gut Using an Improved DNA Detection Protocol

(2009) Bédis Dridi et al.   PLoS One

Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces

(2008) Pauline D Scanlan et al.   ISME Journal

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

(2008) Z. Liu et al.   NUCLEIC ACIDS RESEARCH

Fungi and inflammatory bowel diseases: Alterations of composition and diversity

(2008) Stephan J. Ott et al.   SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY