Analysis of variation at transcription factor binding sites in Drosophila and humans
Published 2012 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Analysis of variation at transcription factor binding sites in Drosophila and humans
Authors
Keywords
-
Journal
GENOME BIOLOGY
Volume 13, Issue 9, Pages R49
Publisher
Springer Nature
Online
2012-09-06
DOI
10.1186/gb-2012-13-9-r49
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A Transcription Factor Collective Defines Cardiac Cell Fate and Reflects Lineage History
- (2012) Guillaume Junion et al. CELL
- The Drosophila melanogaster Genetic Reference Panel
- (2012) Trudy F. C. Mackay et al. NATURE
- Widespread Site-Dependent Buffering of Human Regulatory Polymorphism
- (2012) Matthew T. Maurano et al. PLoS Genetics
- Shadow enhancers: Frequently asked questions about distributed cis-regulatory information and enhancer redundancy
- (2011) Scott Barolo BIOESSAYS
- A cis-regulatory map of the Drosophila genome
- (2011) Nicolas Nègre et al. NATURE
- Does Positive Selection Drive Transcription Factor Binding Site Turnover? A Test with Drosophila Cis-Regulatory Modules
- (2011) Bin Z. He et al. PLoS Genetics
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- CTCF shapes chromatin by multiple mechanisms: the impact of 20 years of CTCF research on understanding the workings of chromatin
- (2010) Rolf Ohlsson et al. CHROMOSOMA
- Charting the genetic interaction map of a cell
- (2010) Michael Costanzo et al. CURRENT OPINION IN BIOTECHNOLOGY
- Drosophila melanogaster recombination rate calculator
- (2010) Anna-Sophie Fiston-Lavier et al. GENE
- Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers
- (2010) V. Gotea et al. GENOME RESEARCH
- Genetic analysis of variation in transcription factor binding in yeast
- (2010) Wei Zheng et al. NATURE
- A map of human genome variation from population-scale sequencing
- (2010) Richard M. Durbin et al. NATURE
- Genomewide Association Studies and Assessment of the Risk of Disease
- (2010) Teri A. Manolio NEW ENGLAND JOURNAL OF MEDICINE
- Variation in Transcription Factor Binding Among Humans
- (2010) M. Kasowski et al. SCIENCE
- Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
- (2010) D. Schmidt et al. SCIENCE
- Heritable Individual-Specific and Allele-Specific Chromatin Signatures in Humans
- (2010) R. McDaniell et al. SCIENCE
- The strength of transcription-factor binding modulates co-variation in transcriptional networks
- (2010) Sergey V. Nuzhdin et al. TRENDS IN GENETICS
- Conserved expression without conserved regulatory sequence: the more things change, the more they stay the same
- (2010) Matthew T. Weirauch et al. TRENDS IN GENETICS
- The study of eQTL variations by RNA-seq: from SNPs to phenotypes
- (2010) Jacek Majewski et al. TRENDS IN GENETICS
- Dynamic evolution of precise regulatory encodings creates the clustered site signature of enhancers
- (2010) Justin Crocker et al. Nature Communications
- Binding Site Turnover Produces Pervasive Quantitative Changes in Transcription Factor Binding between Closely Related Drosophila Species
- (2010) Robert K. Bradley et al. PLOS BIOLOGY
- Evolutionary Mirages: Selection on Binding Site Composition Creates the Illusion of Conserved Grammars in Drosophila Enhancers
- (2010) Richard W. Lusk et al. PLoS Genetics
- Statistical tests for natural selection on regulatory regions based on the strength of transcription factor binding sites
- (2009) Alan M Moses BMC EVOLUTIONARY BIOLOGY
- Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions
- (2009) A. M. Bushey et al. GENES & DEVELOPMENT
- Combinatorial binding predicts spatio-temporal cis-regulatory activity
- (2009) Robert P. Zinzen et al. NATURE
- ChIP-seq accurately predicts tissue-specific activity of enhancers
- (2009) Axel Visel et al. NATURE
- Impact of DNA-binding position variants on yeast gene expression
- (2009) Krishna B. S. Swamy et al. NUCLEIC ACIDS RESEARCH
- JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
- (2009) Elodie Portales-Casamar et al. NUCLEIC ACIDS RESEARCH
- DNA Binding Site Sequence Directs Glucocorticoid Receptor Structure and Activity
- (2009) S. H. Meijsing et al. SCIENCE
- Evolution of Regulatory Sequences in 12 Drosophila Species
- (2009) Jaebum Kim et al. PLoS Genetics
- Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions
- (2009) Stewart MacArthur et al. GENOME BIOLOGY
- Genome-wide nucleotide-level mammalian ancestor reconstruction
- (2008) B. Paten et al. GENOME RESEARCH
- FlyBase: enhancing Drosophila Gene Ontology annotations
- (2008) S. Tweedie et al. NUCLEIC ACIDS RESEARCH
- Evolution Acts on Enhancer Organization to Fine-Tune Gradient Threshold Readouts
- (2008) Justin Crocker et al. PLOS BIOLOGY
- Sepsid even-skipped Enhancers Are Functionally Conserved in Drosophila Despite Lack of Sequence Conservation
- (2008) Emily E. Hare et al. PLoS Genetics
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More