Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

MicroRNAs of Bombyx mori identified by Solexa sequencing

(2010) Shiping Liu et al.   BMC GENOMICS

Genome-scale analysis and comparison of gene expression profiles in developing and germinated pollen in Oryza sativa

(2010) Li Q Wei et al.   BMC GENOMICS

Small RNAs in mammalian germline: Tiny for immortal

(2010) Fuchou Tang   DIFFERENTIATION

Small RNAs in angiosperm gametophytes: from epigenetics to gamete development

(2010) G. Le Trionnaire et al.   GENES & DEVELOPMENT

Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

(2010) G. Zhang et al.   GENOME RESEARCH

DNA Methylation Mediated by a MicroRNA Pathway

(2010) Liang Wu et al.   MOLECULAR CELL

Transcriptome-wide identification of microRNA targets in rice

(2010) Yong-Fang Li et al.   PLANT JOURNAL

Conservation and divergence in eukaryotic DNA methylation

(2010) T.-f. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation

(2010) A. Zemach et al.   SCIENCE

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana

(2009) Robert Grant-Downton et al.   BMC GENOMICS

Epigenetic Reprogramming and Small RNA Silencing of Transposable Elements in Pollen

(2009) R. Keith Slotkin et al.   CELL

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Origins and Mechanisms of miRNAs and siRNAs

(2009) Richard W. Carthew et al.   CELL

Male gametophyte development: a molecular perspective

(2009) M. Borg et al.   JOURNAL OF EXPERIMENTAL BOTANY

Epigenetics in spermatogenesis

(2009) Jacquetta M. Trasler   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Small RNA Pathways Are Present and Functional in the Angiosperm Male Gametophyte

(2009) Robert Grant-Downton et al.   Molecular Plant

Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize

(2009) X. Wang et al.   PLANT CELL

Rice MicroRNA Effector Complexes and Targets

(2009) L. Wu et al.   PLANT CELL

Small RNA Deep Sequencing Reveals Role for Arabidopsis thaliana RNA-Dependent RNA Polymerases in Viral siRNA Biogenesis

(2009) Xiaopeng Qi et al.   PLoS One

Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome

(2009) C. Addo-Quaye et al.   RNA

Gibberellin Acts through Jasmonate to Control the Expression of MYB21, MYB24, and MYB57 to Promote Stamen Filament Growth in Arabidopsis

(2009) Hui Cheng et al.   PLoS Genetics

Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development

(2009) Masaomi Kato et al.   GENOME BIOLOGY

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice

(2008) Séverine Lacombe et al.   BMC PLANT BIOLOGY

Identification of novel and candidate miRNAs in rice by high throughput sequencing

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

Endogenous siRNA and miRNA Targets Identified by Sequencing of the Arabidopsis Degradome

(2008) Charles Addo-Quaye et al.   CURRENT BIOLOGY

The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen

(2008) Joyce A. Cartagena et al.   DEVELOPMENTAL BIOLOGY

Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa

(2008) R. D. Morin et al.   GENOME RESEARCH

On the Expansion of the Pentatricopeptide Repeat Gene Family in Plants

(2008) N. O'Toole et al.   MOLECULAR BIOLOGY AND EVOLUTION

Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

(2008) Marcelo A German et al.   NATURE BIOTECHNOLOGY

OligoHeatMap (OHM): an online tool to estimate and display hybridizations of oligonucleotides onto DNA sequences

(2008) O. Croce et al.   NUCLEIC ACIDS RESEARCH

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

Auxin Regulates Arabidopsis Anther Dehiscence, Pollen Maturation, and Filament Elongation

(2008) V. Cecchetti et al.   PLANT CELL

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Comparative Transcriptomics of Arabidopsis Sperm Cells

(2008) F. Borges et al.   PLANT PHYSIOLOGY

Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)

(2008) C. Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Conserved themes in small-RNA-mediated transposon control

(2008) Angélique Girard et al.   TRENDS IN CELL BIOLOGY

MicroRNA miR-24 inhibits erythropoiesis by targeting activin type I receptor ALK4

(2007) Q. Wang et al.   BLOOD