An Intelligent System for Identifying Acetylated Lysine on Histones and Nonhistone Proteins

Identification and characterization of lysine-methylated sites on histones and non-histone proteins

(2014) Tzong-Yi Lee et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

dbSNO: a database of cysteine S-nitrosylation

(2012) Tzong-Yi Lee et al.   BIOINFORMATICS

Systematic analysis of human lysine acetylation proteins and accurate prediction of human lysine acetylation through bi-relative adapted binomial score Bayes feature representation

(2012) Jianlin Shao et al.   Molecular BioSystems

Identifying Protein Phosphorylation Sites with Kinase Substrate Specificity on Human Viruses

(2012) Neil Arvin Bretaña et al.   PLoS One

Proteomic Analysis of Lysine Acetylation Sites in Rat Tissues Reveals Organ Specificity and Subcellular Patterns

(2012) Alicia Lundby et al.   Cell Reports

LIBSVM

(2012) Chih-Chung Chang et al.   ACM Transactions on Intelligent Systems and Technology

Exploiting maximal dependence decomposition to identify conserved motifs from a group of aligned signal sequences

(2011) Tzong-Yi Lee et al.   BIOINFORMATICS

PlantPhos: using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity

(2011) Tzong-Yi Lee et al.   BMC BIOINFORMATICS

Carboxylator: incorporating solvent-accessible surface area for identifying protein carboxylation sites

(2011) Cheng-Tsung Lu et al.   JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

Characterization and Prediction of Lysine (K)-Acetyl-Transferase Specific Acetylation Sites

(2011) Tingting Li et al.   MOLECULAR & CELLULAR PROTEOMICS

SNOSite: Exploiting Maximal Dependence Decomposition to Identify Cysteine S-Nitrosylation with Substrate Site Specificity

(2011) Tzong-Yi Lee et al.   PLoS One

N-Ace: Using solvent accessibility and physicochemical properties to identify protein N-acetylation sites

(2010) Tzong-Yi Lee et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Lysine acetylation sites prediction using an ensemble of support vector machine classifiers

(2010) Yan Xu et al.   JOURNAL OF THEORETICAL BIOLOGY

Incorporating structural characteristics for identification of protein methylation sites

(2009) Dray-Ming Shien et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Improved Prediction of Lysine Acetylation by Support Vector Machines

(2009) Songling Li et al.   PROTEIN AND PEPTIDE LETTERS

Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions

(2009) C. Choudhary et al.   SCIENCE

Acetylation Goes Global: The Emergence of Acetylation Biology

(2009) K. L. Norris et al.   Science Signaling

VirusMINT: a viral protein interaction database

(2008) A. Chatr-aryamontri et al.   NUCLEIC ACIDS RESEARCH