A Survey on Evolutionary Algorithm Based Hybrid Intelligence in Bioinformatics

Incorporating time-delays in S-System model for reverse engineering genetic networks

(2013) Ahsan Chowdhury et al.   BMC BIOINFORMATICS

SS-mPMG and SS-GA: Tools for Finding Pathways and Dynamic Simulation of Metabolic Networks

(2013) Tetsuo Katsuragi et al.   PLANT AND CELL PHYSIOLOGY

An Evolutionary Algorithm Approach for Feature Generation from Sequence Data and Its Application to DNA Splice Site Prediction

(2012) Uday Kamath et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Conserved host–pathogen PPIs : Globally conserved inter-species bacterial PPIs based conserved host-pathogen interactome derived novel target in C. pseudotuberculosis, C. diphtheriae, M. tuberculosis, C. ulcerans, Y. pestis, and E. coli targeted by Piper betel compounds

(2012) Debmalya Barh et al.   Integrative Biology

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Genome-wide enhancer prediction from epigenetic signatures using genetic algorithm-optimized support vector machines

(2012) Michael Fernández et al.   NUCLEIC ACIDS RESEARCH

Predicting missing expression values in gene regulatory networks using a discrete logic modeling optimization guided by network stable states

(2012) Isaac Crespo et al.   NUCLEIC ACIDS RESEARCH

Parameter estimation in systems biology models using spline approximation

(2011) Choujun Zhan et al.   BMC Systems Biology

Tag SNP selection via a genetic algorithm

(2010) Ghasem Mahdevar et al.   JOURNAL OF BIOMEDICAL INFORMATICS

A multi-objective differential evolutionary approach toward more stable gene regulatory networks

(2009) Afshin Esmaeili et al.   BIOSYSTEMS

A novel ACO–GA hybrid algorithm for feature selection in protein function prediction

(2009) Shahla Nemati et al.   EXPERT SYSTEMS WITH APPLICATIONS

Systems biology: parameter estimation for biochemical models

(2009) Maksat Ashyraliyev et al.   FEBS Journal

Parameter estimation and optimal experimental design

(2008) Julio R. Banga et al.   Essays in Biochemistry

Uncovering signal transduction networks from high-throughput data by integer linear programming

(2008) Xing-Ming Zhao et al.   NUCLEIC ACIDS RESEARCH

Drug Target Identification Using Side-Effect Similarity

(2008) M. Campillos et al.   SCIENCE