Structural diversity of eukaryotic 18S rRNA and its impact on alignment and phylogenetic reconstruction

Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees

(2010) Alexander Keller et al.   Biology Direct

ITS2 sequence–structure analysis in phylogenetics: A how-to manual for molecular systematics

(2009) Jörg Schultz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Accurate and efficient reconstruction of deep phylogenies from structured RNAs

(2009) Roman R. Stocsits et al.   NUCLEIC ACIDS RESEARCH

ProfDistS: (profile-) distance based phylogeny on sequence--structure alignments

(2008) M. Wolf et al.   BIOINFORMATICS

18S rRNA hyper-elongation and the phylogeny of Euhemiptera (Insecta: Hemiptera)

(2008) Qiang Xie et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenetic comparison of local length plasticity of the small subunit of nuclear rDNAs among all Hexapoda orders and the impact of hyper-length-variation on alignment

(2008) Qiang Xie et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

EEF2 Analysis Challenges the Monophyly of Archaeplastida and Chromalveolata

(2008) Eunsoo Kim et al.   PLoS One

Structure of the Mammalian 80S Ribosome at 8.7 Å Resolution

(2008) Preethi Chandramouli et al.   STRUCTURE