Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion Virulence Regulon across the Pseudomonas syringae Phylogeny

The Life History ofPseudomonas syringae: Linking Agriculture to Earth System Processes

(2013) Cindy E. Morris et al.   Annual Review of Phytopathology

Thermo-Regulation of Genes Mediating Motility and Plant Interactions in Pseudomonas syringae

(2013) Kevin L. Hockett et al.   PLoS One

Comparative Genomics of Multiple Strains of Pseudomonas cannabina pv. alisalensis, a Potential Model Pathogen of Both Monocots and Dicots

(2013) Panagiotis F. Sarris et al.   PLoS One

Pseudomonas syringae pv. actinidiae from Recent Outbreaks of Kiwifruit Bacterial Canker Belong to Different Clones That Originated in China

(2013) Margi I. Butler et al.   PLoS One

The Type III Secreted Effector DspE Is Required Early in Solanum tuberosum Leaf Infection by Pectobacterium carotovorum to Cause Cell Death, and Requires Wx(3–6)D/E Motifs

(2013) Clifford S. Hogan et al.   PLoS One

The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster

(2013) Kathryn E. Bushley et al.   PLoS Genetics

Genomic Analysis of the Kiwifruit Pathogen Pseudomonas syringae pv. actinidiae Provides Insight into the Origins of an Emergent Plant Disease

(2013) Honour C. McCann et al.   PLoS Pathogens

Disease resistance or growth: the role of plant hormones in balancing immune responses and fitness costs

(2013) Nicolas Denancé et al.   Frontiers in Plant Science

Unproductive alternative splicing and nonsense mRNAs: A widespread phenomenon among plant circadian clock genes

(2012) Sergei A Filichkin et al.   Biology Direct

Phylogenetic analysis of a gene cluster encoding an additional, rhizobial-like type III secretion system that is narrowly distributed among Pseudomonas syringae strains

(2012) Anastasia D Gazi et al.   BMC MICROBIOLOGY

Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut

(2012) Heath E O’Brien et al.   BMC MICROBIOLOGY

RNA-seq Analysis Reveals That an ECF σ Factor, AcsS, Regulates Achromobactin Biosynthesis in Pseudomonas syringae pv. syringae B728a

(2012) Jessica W. Greenwald et al.   PLoS One

Genetic Analysis of the Individual Contribution to Virulence of the Type III Effector Inventory of Pseudomonas syringae pv. phaseolicola

(2012) Alberto P. Macho et al.   PLoS One

TLR13 Recognizes Bacterial 23S rRNA Devoid of Erythromycin Resistance-Forming Modification

(2012) M. Oldenburg et al.   SCIENCE

High quality draft genome sequence of Segniliparus rugosus CDC 945T= (ATCC BAA-974T)

(2012) Ashlee M. Earl et al.   Standards in Genomic Sciences

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

(2012) Joyce E. Loper et al.   PLoS Genetics

Next-generation genomics of Pseudomonas syringae

(2011) Heath E. O’Brien et al.   CURRENT OPINION IN MICROBIOLOGY

Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors

(2011) R. RYAN MCNALLY et al.   MOLECULAR PLANT PATHOLOGY

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

(2011) Cornelius Schmidtke et al.   NUCLEIC ACIDS RESEARCH

GENE-Counter: A Computational Pipeline for the Analysis of RNA-Seq Data for Gene Expression Differences

(2011) Jason S. Cumbie et al.   PLoS One

Genome-Wide Identification of Transcriptional Start Sites in the Plant Pathogen Pseudomonas syringae pv. tomato str. DC3000

(2011) Melanie J. Filiatrault et al.   PLoS One

Genetic disassembly and combinatorial reassembly identify a minimal functional repertoire of type III effectors in Pseudomonas syringae

(2011) S. Cunnac et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity

(2011) Rongman Cai et al.   PLoS Pathogens

Dynamic Evolution of Pathogenicity Revealed by Sequencing and Comparative Genomics of 19 Pseudomonas syringae Isolates

(2011) David A. Baltrus et al.   PLoS Pathogens

Transcriptome Analysis of Pseudomonas syringae Identifies New Genes, Noncoding RNAs, and Antisense Activity

(2010) M. J. Filiatrault et al.   JOURNAL OF BACTERIOLOGY

FAD Binding by ApbE Protein from Salmonella enterica: a New Class of FAD-Binding Proteins

(2010) J. M. Boyd et al.   JOURNAL OF BACTERIOLOGY

Pseudomonas syringaeStrains Naturally Lacking the ClassicalP. syringae hrp/hrcLocus Are Common Leaf Colonizers Equipped with an Atypical Type III Secretion System

(2010) Christopher R. Clarke et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Comparative Genome Analysis Provides Insights into the Evolution and Adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum

(2010) Sarah Green et al.   PLoS One

Pseudomonas cannabina pv. cannabina pv. nov., and Pseudomonas cannabina pv. alisalensis (Cintas Koike and Bull, 2000) comb. nov., are members of the emended species Pseudomonas cannabina (ex Šutič & Dowson 1959) Gardan, Shafik, Belouin, Brosch, Grimont & Grimont 1999

(2010) Carolee T. Bull et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Inferring the Evolutionary History of the Plant Pathogen Pseudomonas syringae from Its Biogeography in Headwaters of Rivers in North America, Europe, and New Zealand

(2010) C. E. Morris et al.   mBio

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528

(2009) David J Studholme et al.   BMC GENOMICS

Phylogenetic evidence for extensive horizontal gene transfer of type III secretion system genes among enterobacterial plant pathogens

(2009) M. Naum et al.   MICROBIOLOGY-SGM

Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products

(2009) T. Mukaihara et al.   MICROBIOLOGY-SGM

Deletions in the Repertoire of Pseudomonas syringae pv. tomato DC3000 Type III Secretion Effector Genes Reveal Functional Overlap among Effectors

(2009) Brian H. Kvitko et al.   PLoS Pathogens

Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens

(2009) Mark W Silby et al.   GENOME BIOLOGY

De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae

(2008) J. A. Reinhardt et al.   GENOME RESEARCH

The life history of the plant pathogen Pseudomonas syringae is linked to the water cycle

(2008) Cindy E Morris et al.   ISME Journal

Naturally Occurring Nonpathogenic Isolates of the Plant Pathogen Pseudomonas syringae Lack a Type III Secretion System and Effector Gene Orthologues

(2008) T. J. Mohr et al.   JOURNAL OF BACTERIOLOGY

Roadmap to New Virulence Determinants inPseudomonas syringae: Insights from Comparative Genomics and Genome Organization

(2008) Magdalen Lindeberg et al.   MOLECULAR PLANT-MICROBE INTERACTIONS