Mapping the Phosphoproteome of Influenza A and B Viruses by Mass Spectrometry

Small molecule inhibitors of the c-Jun N-terminal kinase (JNK) possess antiviral activity against highly pathogenic avian and human pandemic influenza A viruses

(2012) Wolfgang Nacken et al.   BIOLOGICAL CHEMISTRY

Phosphorylation meets nuclear import: a review

(2012) Jonathan D Nardozzi et al.   Cell Communication and Signaling

Structural Basis for RNA Binding and Homo-Oligomer Formation by Influenza B Virus Nucleoprotein

(2012) A. K.-L. Ng et al.   JOURNAL OF VIROLOGY

Cyclophilin A Restricts Influenza A Virus Replication through Degradation of the M1 Protein

(2012) Xiaoling Liu et al.   PLoS One

Compensatory Evolution of Net-Charge in Influenza A Virus Hemagglutinin

(2012) Yuki Kobayashi et al.   PLoS One

An Overlapping Protein-Coding Region in Influenza A Virus Segment 3 Modulates the Host Response

(2012) B. W. Jagger et al.   SCIENCE

Spatial structure peculiarities of influenza A virus matrix M1 protein in an acidic solution that simulates the internal lysosomal medium

(2011) Alexander Shishkov et al.   FEBS Journal

Characterization of the interaction between the influenza A virus polymerase subunit PB1 and the host nuclear import factor Ran-binding protein 5

(2011) E. C. Hutchinson et al.   JOURNAL OF GENERAL VIROLOGY

Is There a Twelfth Protein-Coding Gene in the Genome of Influenza A? A Selection-Based Approach to the Detection of Overlapping Genes in Closely Related Sequences

(2011) Niv Sabath et al.   JOURNAL OF MOLECULAR EVOLUTION

Receptor Tyrosine Kinase Inhibitors Block Multiple Steps of Influenza A Virus Replication

(2011) N. Kumar et al.   JOURNAL OF VIROLOGY

The Influenza A Virus NS1 Protein Interacts with the Nucleoprotein of Viral Ribonucleoprotein Complexes

(2011) N. C. Robb et al.   JOURNAL OF VIROLOGY

A solid phase extraction-based platform for rapid phosphoproteomic analysis

(2011) Noah Dephoure et al.   METHODS

iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates

(2011) David Shteynberg et al.   MOLECULAR & CELLULAR PROTEOMICS

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Inhibition of MLC Phosphorylation Restricts Replication of Influenza Virus—A Mechanism of Action for Anti-Influenza Agents

(2011) Mehran Haidari et al.   PLoS One

Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline

(2011) David C. Trudgian et al.   PROTEOMICS

Phosphorylation events during viral infections provide potential therapeutic targets

(2011) Julie A. Keating et al.   REVIEWS IN MEDICAL VIROLOGY

Towards a Functional Understanding of Protein N-Terminal Acetylation

(2011) Thomas Arnesen   PLOS BIOLOGY

CPFP: a central proteomics facilities pipeline

(2010) D. C. Trudgian et al.   BIOINFORMATICS

Towards an atomic resolution understanding of the influenza virus replication machinery

(2010) Rob WH Ruigrok et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Functional Analysis of the Influenza Virus H5N1 Nucleoprotein Tail Loop Reveals Amino Acids That Are Crucial for Oligomerization and Ribonucleoprotein Activities

(2010) W.-H. Chan et al.   JOURNAL OF VIROLOGY

Confident Phosphorylation Site Localization Using the Mascot Delta Score

(2010) Mikhail M. Savitski et al.   MOLECULAR & CELLULAR PROTEOMICS

The complete influenza hemagglutinin fusion domain adopts a tight helical hairpin arrangement at the lipid:water interface

(2010) J. L. Lorieau et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insight into the Mechanism of the Influenza A Proton Channel from a Structure in a Lipid Bilayer

(2010) M. Sharma et al.   SCIENCE

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Phosphorylation of the influenza A virus protein PB1-F2 by PKC is crucial for apoptosis promoting functions in monocytes

(2009) David Mitzner et al.   CELLULAR MICROBIOLOGY

Influenza A virus proteins PB1 and NS1 are subject to functionally important phosphorylation by protein kinase C

(2009) S. Mahmoudian et al.   JOURNAL OF GENERAL VIROLOGY

NS2/NEP protein regulates transcription and replication of the influenza virus RNA genome

(2009) Nicole C. Robb et al.   JOURNAL OF GENERAL VIROLOGY

A Complicated Message: Identification of a Novel PB1-Related Protein Translated from Influenza A Virus Segment 2 mRNA

(2009) H. M. Wise et al.   JOURNAL OF VIROLOGY

Amino Acid Residues in the Fusion Peptide Pocket Regulate the pH of Activation of the H5N1 Influenza Virus Hemagglutinin Protein

(2009) M. L. Reed et al.   JOURNAL OF VIROLOGY

Solution structure and functional analysis of the influenza B proton channel

(2009) Junfeng Wang et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Hemagglutinin Receptor Binding Avidity Drives Influenza A Virus Antigenic Drift

(2009) S. E. Hensley et al.   SCIENCE

Structural basis for oseltamivir resistance of influenza viruses

(2009) P.J. Collins et al.   VACCINE

Global and Site-Specific Quantitative Phosphoproteomics: Principles and Applications

(2008) Boris Macek et al.   Annual Review of Pharmacology and Toxicology

Dating the time of viral subtype divergence

(2008) John D O'Brien et al.   BMC EVOLUTIONARY BIOLOGY

Structural basis for dsRNA recognition by NS1 protein of influenza A virus

(2008) Ao Cheng et al.   CELL RESEARCH

The multifunctional NS1 protein of influenza A viruses

(2008) B. G. Hale et al.   JOURNAL OF GENERAL VIROLOGY

Avian Influenza A Virus Polymerase Association with Nucleoprotein, but Not Polymerase Assembly, Is Impaired in Human Cells during the Course of Infection

(2008) M.-A. Rameix-Welti et al.   JOURNAL OF VIROLOGY

Structural Characterization of the 1918 Influenza Virus H1N1 Neuraminidase

(2008) X. Xu et al.   JOURNAL OF VIROLOGY

Crystal structure of the polymerase PAC–PB1N complex from an avian influenza H5N1 virus

(2008) Xiaojing He et al.   NATURE

The structural basis for an essential subunit interaction in influenza virus RNA polymerase

(2008) Eiji Obayashi et al.   NATURE

The Jpred 3 secondary structure prediction server

(2008) C. Cole et al.   NUCLEIC ACIDS RESEARCH

Non-functional phosphorylations?

(2008) Gustav E. Lienhard   TRENDS IN BIOCHEMICAL SCIENCES

CDK/ERK-mediated phosphorylation of the human influenza A virus NS1 protein at threonine-215

(2008) Benjamin G. Hale et al.   VIROLOGY