Conserved Translatome Remodeling in Nematode Species Executing a Shared Developmental Transition

Nutritional control of mRNA isoform expression during developmental arrest and recovery in C. elegans

(2012) C. S. Maxwell et al.   GENOME RESEARCH

Contributions of mRNA abundance, ribosome loading, and post- or peri-translational effects to temporal repression of C. elegans heterochronic miRNA targets

(2012) M. Stadler et al.   GENOME RESEARCH

A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits

(2011) Karin C Kiontke et al.   BMC EVOLUTIONARY BIOLOGY

Reconsidering Movement of Eukaryotic mRNAs between Polysomes and P Bodies

(2011) Joshua A. Arribere et al.   MOLECULAR CELL

Wobble base-pairing slows in vivo translation elongation in metazoans

(2011) M. Stadler et al.   RNA

Gene expression, metabolic regulation and stress tolerance during diapause

(2010) Thomas H. MacRae   CELLULAR AND MOLECULAR LIFE SCIENCES

Regulatory divergence in Drosophila revealed by mRNA-seq

(2010) C. J. McManus et al.   GENOME RESEARCH

Protein abundances are more conserved than mRNA abundances across diverse taxa

(2010) Jon M. Laurent et al.   PROTEOMICS

Conserved developmental transcriptomes in evolutionarily divergent species

(2010) Anup Parikh et al.   GENOME BIOLOGY

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Optimization of gene expression by natural selection

(2009) T. Bedford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Starvation Protects Germline Stem Cells and Extends Reproductive Longevity in C. elegans

(2009) G. Angelo et al.   SCIENCE

RNA Pol II Accumulates at Promoters of Growth Genes During Developmental Arrest

(2009) L. Ryan Baugh et al.   SCIENCE

A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation

(2009) I. Tirosh et al.   SCIENCE

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

(2009) N. T. Ingolia et al.   SCIENCE

Stress-Dependent Coordination of Transcriptome and Translatome in Yeast

(2009) Regula E Halbeisen et al.   PLOS BIOLOGY

Comparative Functional Analysis of the Caenorhabditis elegans and Drosophila melanogaster Proteomes

(2009) Sabine P Schrimpf et al.   PLOS BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY