Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma

Hybridisation between two cyprinid fishes in a novel habitat: genetics, morphology and life-history traits

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Nuclear and Genome Dynamics in Multinucleate Ascomycete Fungi

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Degeneration in Codon Usage within the Region of Suppressed Recombination in the Mating-Type Chromosomes of Neurospora tetrasperma

(2011) C. A. Whittle et al.   EUKARYOTIC CELL

Massive Changes in Genome Architecture Accompany the Transition to Self-Fertility in the Filamentous FungusNeurospora tetrasperma

(2011) Christopher E. Ellison et al.   GENETICS

Evidence of the accumulation of allele-specific non-synonymous substitutions in the young region of recombination suppression within the mating-type chromosomes of Neurospora tetrasperma

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Amplified fragment length polymorphism and sequence analyses reveal massive gene introgression from the European fungal pathogen Heterobasidion annosum into its introduced congener H. irregulare

(2011) P. GONTHIER et al.   MOLECULAR ECOLOGY

A comprehensive phylogeny of Neurospora reveals a link between reproductive mode and molecular evolution in fungi

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Population genomics and local adaptation in wild isolates of a model microbial eukaryote

(2011) C. E. Ellison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Architecture of a Reinforced, Postmating, Reproductive Isolation Barrier between Neurospora Species Indicates Evolution via Natural Selection

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Divergence with Gene Flow: Models and Data

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BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis

(2010) Bret R. Larget et al.   BIOINFORMATICS

Gene genealogies indicates abundant gene conversions and independent evolutionary histories of the mating-type chromosomes in the evolutionary history of Neurospora tetrasperma

(2010) Audrius Menkis et al.   BMC EVOLUTIONARY BIOLOGY

Whole genome evaluation of horizontal transfers in the pathogenic fungus Aspergillus fumigatus

(2010) Ludovic V Mallet et al.   BMC GENOMICS

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

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Conflict between reproductive gene trees and species phylogeny among heterothallic and pseudohomothallic members of the filamentous ascomycete genus Neurospora

(2010) Rebecka Strandberg et al.   FUNGAL GENETICS AND BIOLOGY

Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

(2010) D. E. Neafsey et al.   GENOME RESEARCH

Maintenance of Fungal Pathogen Species That Are Specialized to Different Hosts: Allopatric Divergence and Introgression through Secondary Contact

(2010) P. Gladieux et al.   MOLECULAR BIOLOGY AND EVOLUTION

Yeast evolutionary genomics

(2010) Bernard Dujon   NATURE REVIEWS GENETICS

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

Genetic Consequences of Range Expansions

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The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Phylogenetic and biological species diversity within theNeurospora tetraspermacomplex

(2009) A. MENKIS et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Three new phylogenetic and biological Neurospora species: N. hispaniola, N. metzenbergii and N. perkinsii

(2009) Christopher F. Villalta et al.   MYCOLOGIA

The evolutionary origins of beneficial alleles during the repeated adaptation of garter snakes to deadly prey

(2009) C. R. Feldman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gene Trees Reveal Repeated Instances of Mitochondrial DNA Introgression in Orangethroat Darters (Percidae: Etheostoma)

(2009) Christen M. Bossu et al.   SYSTEMATIC BIOLOGY

The Genomics of Speciation in Drosophila: Diversity, Divergence, and Introgression Estimated Using Low-Coverage Genome Sequencing

(2009) Rob J. Kulathinal et al.   PLoS Genetics

The evolutionary trajectory of the mating-type (mat) genes in Neurospora relates to reproductive behavior of taxa

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The Chicken (Gallus gallus) Z Chromosome Contains at Least Three Nonlinear Evolutionary Strata

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jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

The Mating-Type Chromosome in the Filamentous Ascomycete Neurospora tetrasperma Represents a Model for Early Evolution of Sex Chromosomes

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