Properties of MHC Class I Presented Peptides That Enhance Immunogenicity

Naive Precursor Frequencies and MHC Binding Rather Than the Degree of Epitope Diversity Shape CD8+ T Cell Immunodominance

(2014) M. F. Kotturi et al.   JOURNAL OF IMMUNOLOGY

Comprehensive analysis of dengue virus-specific responses supports an HLA-linked protective role for CD8+ T cells

(2013) D. Weiskopf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Degenerate T-cell Recognition of Peptides on MHC Molecules Creates Large Holes in the T-cell Repertoire

(2012) Jorg J. A. Calis et al.   PLoS Computational Biology

POPISK: T-cell reactivity prediction using support vector machines and string kernels

(2011) Chun-Wei Tung et al.   BMC BIOINFORMATICS

The role of the proteasome in the generation of MHC class I ligands and immune responses

(2011) E. J. A. M. Sijts et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

CD8+ T Cells: Foot Soldiers of the Immune System

(2011) Nu Zhang et al.   IMMUNITY

Insights into HLA-Restricted T Cell Responses in a Novel Mouse Model of Dengue Virus Infection Point toward New Implications for Vaccine Design

(2011) Daniela Weiskopf et al.   JOURNAL OF IMMUNOLOGY

Enumeration of human antigen-specific naive CD8+ T cells reveals conserved precursor frequencies

(2010) C. Alanio et al.   BLOOD

MHC class I molecules exploit the low G+C content of pathogen genomes for enhanced presentation

(2010) Jorg J. A. Calis et al.   EUROPEAN JOURNAL OF IMMUNOLOGY

Impact of TCR Reactivity and HLA Phenotype on Naive CD8 T Cell Frequency in Humans

(2010) F. Legoux et al.   JOURNAL OF IMMUNOLOGY

Interdisciplinary Analysis of HIV-Specific CD8+ T Cell Responses against Variant Epitopes Reveals Restricted TCR Promiscuity

(2010) I. Hoof et al.   JOURNAL OF IMMUNOLOGY

Transgenic mice with a diverse human T cell antigen receptor repertoire

(2010) Liang-Ping Li et al.   NATURE MEDICINE

Transmission of Single HIV-1 Genomes and Dynamics of Early Immune Escape Revealed by Ultra-Deep Sequencing

(2010) Will Fischer et al.   PLoS One

Convergent recombination shapes the clonotypic landscape of the naive T-cell repertoire

(2010) M. F. Quigley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An unanticipated lack of consensus cytotoxic T lymphocyte epitopes in HIV-1 databases: the contribution of prediction programs

(2009) Ingrid MM Schellens et al.   AIDS

Structural alterations in peptide–MHC recognition by self-reactive T cell receptors

(2009) Kai W Wucherpfennig et al.   CURRENT OPINION IN IMMUNOLOGY

Quantitating T Cell Cross-Reactivity for Unrelated Peptide Antigens

(2009) J. Ishizuka et al.   JOURNAL OF IMMUNOLOGY

Restricted Autoantigen Recognition Associated with Deletional and Adaptive Regulatory Mechanisms

(2009) J. A. Gebe et al.   JOURNAL OF IMMUNOLOGY

MHC Drives TCR Repertoire Shaping, but not Maturation, in Recent Thymic Emigrants

(2009) E. G. Houston et al.   JOURNAL OF IMMUNOLOGY

Germline-encoded amino acids in the αβ T-cell receptor control thymic selection

(2009) James P. Scott-Browne et al.   NATURE

The molecular basis of TCR germline bias for MHC is surprisingly simple

(2009) K Christopher Garcia et al.   NATURE IMMUNOLOGY

Antigen processing influences HIV-specific cytotoxic T lymphocyte immunodominance

(2009) Stefan Tenzer et al.   NATURE IMMUNOLOGY

The Immune Epitope Database 2.0

(2009) Randi Vita et al.   NUCLEIC ACIDS RESEARCH

A Multivalent and Cross-Protective Vaccine Strategy against Arenaviruses Associated with Human Disease

(2009) Maya F. Kotturi et al.   PLoS Pathogens

Endogenous Naive CD8+ T Cell Precursor Frequency Regulates Primary and Memory Responses to Infection

(2008) Joshua J. Obar et al.   IMMUNITY

NetMHCpan, a method for MHC class I binding prediction beyond humans

(2008) Ilka Hoof et al.   IMMUNOGENETICS

Amino Acid Similarity Accounts for T Cell Cross-Reactivity and for “Holes” in the T Cell Repertoire

(2008) Sune Frankild et al.   PLoS One