Formation of Raft-Like Assemblies within Clusters of Influenza Hemagglutinin Observed by MD Simulations

Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes

(2012) Matti Javanainen et al.   FARADAY DISCUSSIONS

Molecular view on protein sorting into liquid-ordered membrane domains mediated by gangliosides and lipid anchors

(2012) Djurre H. de Jong et al.   FARADAY DISCUSSIONS

Quantitative analysis of the lipidomes of the influenza virus envelope and MDCK cell apical membrane

(2012) Mathias J. Gerl et al.   JOURNAL OF CELL BIOLOGY

Organization, dynamics, and segregation of Ras nanoclusters in membrane domains

(2012) L. Janosi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transmembrane helices can induce domain formation in crowded model membranes

(2011) Jan Domański et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Two Conserved Residues Are Important for Inducing Highly Ordered Membrane Domains by the Transmembrane Domain of Influenza Hemagglutinin

(2011) Mingtao Ge et al.   BIOPHYSICAL JOURNAL

Aggregation of Model Membrane Proteins, Modulated by Hydrophobic Mismatch, Membrane Curvature, and Protein Class

(2011) Daniel L. Parton et al.   BIOPHYSICAL JOURNAL

Domain formation in membranes with quenched protein obstacles: Lateral heterogeneity and the connection to universality classes

(2011) T. Fischer et al.   JOURNAL OF CHEMICAL PHYSICS

MDAnalysis: A toolkit for the analysis of molecular dynamics simulations

(2011) Naveen Michaud-Agrawal et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Interleaflet Interaction and Asymmetry in Phase Separated Lipid Bilayers: Molecular Dynamics Simulations

(2011) Jason D. Perlmutter et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Raft domains of variable properties and compositions in plasma membrane vesicles

(2011) I. Levental et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lateral sorting in model membranes by cholesterol-mediated hydrophobic matching

(2011) H.-J. Kaiser et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lipid packing drives the segregation of transmembrane helices into disordered lipid domains in model membranes

(2011) L. V. Schafer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell Membranes: The Lipid Perspective

(2011) Ünal Coskun et al.   STRUCTURE

Molecular Simulation Approaches to Membrane Proteins

(2011) Phillip J. Stansfeld et al.   STRUCTURE

Influenza virus assembly and budding

(2011) Jeremy S. Rossman et al.   VIROLOGY

Greasing Their Way: Lipid Modifications Determine Protein Association with Membrane Rafts

(2010) Ilya Levental et al.   BIOCHEMISTRY

Temperature-dependent phase behavior and protein partitioning in giant plasma membrane vesicles

(2010) S.A. Johnson et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

On the Role of Acylation of Transmembrane Proteins

(2010) Diana Morozova et al.   BIOPHYSICAL JOURNAL

Hemagglutinin of Influenza Virus Partitions into the Nonraft Domain of Model Membranes

(2010) Jörg Nikolaus et al.   BIOPHYSICAL JOURNAL

g_membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation

(2010) Maarten G. Wolf et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Role of Glycolipids in Lipid Rafts: A View through Atomistic Molecular Dynamics Simulations with Galactosylceramide

(2010) Anette Hall et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Membrane Proteins Diffuse as Dynamic Complexes with Lipids

(2010) Perttu S. Niemelä et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Lipid Rafts As a Membrane-Organizing Principle

(2010) D. Lingwood et al.   SCIENCE

The relationship between membrane curvature generation and clustering of anchored proteins: a computer simulation study

(2010) Tongtao Yue et al.   Soft Matter

Proteomic Analysis of Plasma Membrane Vesicles

(2009) Brigitte Bauer et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

FLIM-FRET and FRAP reveal association of influenza virus haemagglutinin with membrane rafts

(2009) Stephanie Engel et al.   BIOCHEMICAL JOURNAL

Cholesterol-induced fluid membrane domains: A compendium of lipid-raft ternary phase diagrams

(2009) Derek Marsh   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Peptide Nanopores and Lipid Bilayers: Interactions by Coarse-Grained Molecular-Dynamics Simulations

(2009) Jochen W. Klingelhoefer et al.   BIOPHYSICAL JOURNAL

Concerted diffusion of lipids in raft-like membranes

(2009) Touko Apajalahti et al.   FARADAY DISCUSSIONS

Lateral Distribution of the Transmembrane Domain of Influenza Virus Hemagglutinin Revealed by Time-resolved Fluorescence Imaging

(2009) Silvia Scolari et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Combining an Elastic Network With a Coarse-Grained Molecular Force Field: Structure, Dynamics, and Intermolecular Recognition

(2009) Xavier Periole et al.   Journal of Chemical Theory and Computation

PACKMOL: A package for building initial configurations for molecular dynamics simulations

(2009) L. Martínez et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

The MARTINI Coarse-Grained Force Field: Extension to Proteins

(2008) Luca Monticelli et al.   Journal of Chemical Theory and Computation

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

S Acylation of the Hemagglutinin of Influenza Viruses: Mass Spectrometry Reveals Site-Specific Attachment of Stearic Acid to a Transmembrane Cysteine

(2008) L. V. Kordyukova et al.   JOURNAL OF VIROLOGY

Membrane lipids: where they are and how they behave

(2008) Gerrit van Meer et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The molecular face of lipid rafts in model membranes

(2008) H. J. Risselada et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA