Antimicrobial Peptides Design by Evolutionary Multiobjective Optimization

Antimicrobial peptides: Their physicochemical properties and therapeutic application

(2012) Su-Jin Kang et al.   ARCHIVES OF PHARMACAL RESEARCH

BBH-LS: an algorithm for computing positional homologs using sequence and gene context similarity

(2012) Melvin Zhang et al.   BMC Systems Biology

Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?

(2012) W. G. Touw et al.   BRIEFINGS IN BIOINFORMATICS

ClassAMP: A Prediction Tool for Classification of Antimicrobial Peptides

(2012) Shaini Joseph et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

YADAMP: yet another database of antimicrobial peptides

(2012) Stefano P. Piotto et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

A novel chimeric cell-penetrating peptide with membrane-disruptive properties for efficient endosomal escape

(2012) Fabrizio Salomone et al.   JOURNAL OF CONTROLLED RELEASE

Prediction of Antimicrobial Peptides Based on Sequence Alignment and Feature Selection Methods

(2011) Ping Wang et al.   PLoS One

Prediction of Cell Penetrating Peptides by Support Vector Machines

(2011) William S. Sanders et al.   PLoS Computational Biology

NMR-Based Protein Potentials

(2010) Da-Wei Li et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

AntiBP2: improved version of antibacterial peptide prediction

(2010) Sneh Lata et al.   BMC BIOINFORMATICS

Kinome-wide interaction modelling using alignment-based and alignment-independent approaches for kinase description and linear and non-linear data analysis techniques

(2010) Maris Lapins et al.   BMC BIOINFORMATICS

Computer-Aided Design of Antimicrobial Peptides

(2010) Christopher D. Fjell et al.   Current Pharmaceutical Analysis

Endosomal escape pathways for delivery of biologicals

(2010) Amir K. Varkouhi et al.   JOURNAL OF CONTROLLED RELEASE

The R.E.D. tools: advances in RESP and ESP charge derivation and force field library building

(2010) François-Yves Dupradeau et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Analysis and Prediction of the Metabolic Stability of Proteins Based on Their Sequential Features, Subcellular Locations and Interaction Networks

(2010) Tao Huang et al.   PLoS One

Proteochemometric Modeling of the Susceptibility of Mutated Variants of the HIV-1 Virus to Reverse Transcriptase Inhibitors

(2010) Muhammad Junaid et al.   PLoS One

Identification of Novel Antibacterial Peptides by Chemoinformatics and Machine Learning†

(2009) Christopher D. Fjell et al.   JOURNAL OF MEDICINAL CHEMISTRY

CAMP: a useful resource for research on antimicrobial peptides

(2009) Shaini Thomas et al.   NUCLEIC ACIDS RESEARCH

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

P-LINCS:  A Parallel Linear Constraint Solver for Molecular Simulation

(2007) Berk Hess   Journal of Chemical Theory and Computation