Computational Biomarker Pipeline from Discovery to Clinical Implementation: Plasma Proteomic Biomarkers for Cardiac Transplantation

Computational and Statistical Analysis of Protein Mass Spectrometry Data

(2012) William Stafford Noble et al.   PLoS Computational Biology

Clinical and Genetic Association of Serum Ceruloplasmin With Cardiovascular Risk

(2011) W.H. Wilson Tang et al.   ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY

Case studies in data analysis

(2011) Alison L. Gibbs et al.   CANADIAN JOURNAL OF STATISTICS-REVUE CANADIENNE DE STATISTIQUE

A pipeline that integrates the discovery and verification of plasma protein biomarkers reveals candidate markers for cardiovascular disease

(2011) Terri A Addona et al.   NATURE BIOTECHNOLOGY

A targeted proteomics–based pipeline for verification of biomarkers in plasma

(2011) Jeffrey R Whiteaker et al.   NATURE BIOTECHNOLOGY

Computational Mass Spectrometry–Based Proteomics

(2011) Lukas Käll et al.   PLoS Computational Biology

Proteomic Signatures in Plasma during Early Acute Renal Allograft Rejection

(2010) Gabriela V. Cohen Freue et al.   MOLECULAR & CELLULAR PROTEOMICS

Mass spectrometry in high-throughput proteomics: ready for the big time

(2010) Tommy Nilsson et al.   NATURE METHODS

Confounding Effects in "A Six-Gene Signature Predicting Breast Cancer Lung Metastasis"

(2009) A. C. Culhane et al.   CANCER RESEARCH

Bioinformatics for protein biomarker panel classification: what is needed to bring biomarker panels intoin vitrodiagnostics?

(2009) Xavier Robin et al.   Expert Review of Proteomics

Whole Blood Genomic Biomarkers of Acute Cardiac Allograft Rejection

(2009) David Lin et al.   JOURNAL OF HEART AND LUNG TRANSPLANTATION

Multiple Reaction Monitoring-based, Multiplexed, Absolute Quantitation of 45 Proteins in Human Plasma

(2009) Michael A. Kuzyk et al.   MOLECULAR & CELLULAR PROTEOMICS

Adiponectin Inhibits Allograft Rejection in Murine Cardiac Transplantation

(2009) Yoshihisa Okamoto et al.   TRANSPLANTATION

iTRAQ Experimental Design for Plasma Biomarker Discovery

(2008) Xiaomin Song et al.   JOURNAL OF PROTEOME RESEARCH

Pivotal Evaluation of the Accuracy of a Biomarker Used for Classification or Prediction: Standards for Study Design

(2008) Margaret S. Pepe et al.   JNCI-Journal of the National Cancer Institute

The interface between biomarker discovery and clinical validation: The tar pit of the protein biomarker pipeline

(2008) Amanda G. Paulovich et al.   Proteomics Clinical Applications