A Mathematical Methodology for Determining the Temporal Order of Pathway Alterations Arising during Gliomagenesis

Hallmarks of Cancer: The Next Generation

(2011) Douglas Hanahan et al.   CELL

Molecular subclassification of diffuse gliomas: Seeing order in the chaos

(2011) Jason T. Huse et al.   GLIA

Oncogenetic tree modeling of human hepatocarcinogenesis

(2011) Thomas Longerich et al.   INTERNATIONAL JOURNAL OF CANCER

Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

(2010) Roel G.W. Verhaak et al.   CANCER CELL

The BioPAX community standard for pathway data sharing

(2010) Emek Demir et al.   NATURE BIOTECHNOLOGY

Genomic instability — an evolving hallmark of cancer

(2010) Simona Negrini et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Pathway Commons, a web resource for biological pathway data

(2010) E. G. Cerami et al.   NUCLEIC ACIDS RESEARCH

−8p12–23 and +20q Are Predictors of Subtypes and Metastatic Pathways in Colorectal Cancer: Construction of Tree Models Using Comparative Genomic Hybridization Data

(2010) Xiaobo Li et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Automated Network Analysis Identifies Core Pathways in Glioblastoma

(2010) Ethan Cerami et al.   PLoS One

A mathematical framework to determine the temporal sequence of somatic genetic events in cancer

(2010) Camille Stephan-Otto Attolini et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantifying cancer progression with conjunctive Bayesian networks

(2009) M. Gerstung et al.   BIOINFORMATICS

Cancer-related inflammation, the seventh hallmark of cancer: links to genetic instability

(2009) F. Colotta et al.   CARCINOGENESIS

Principles of Cancer Therapy: Oncogene and Non-oncogene Addiction

(2009) Ji Luo et al.   CELL

Construction of oncogenetic tree models reveals multiple pathways of oral cancer progression

(2009) Swapnali Pathare et al.   INTERNATIONAL JOURNAL OF CANCER

Glioblastoma Subclasses Can Be Defined by Activity among Signal Transduction Pathways and Associated Genomic Alterations

(2009) Cameron Brennan et al.   PLoS One

Genetic Instability Is Not a Requirement for Tumor Development

(2008) W. Bodmer et al.   CANCER RESEARCH

Genomic Instability and Carcinogenesis: An Update

(2008) Wael Abdel-Rahman   CURRENT GENOMICS

Stem Cell–Related “Self-Renewal” Signature and High Epidermal Growth Factor Receptor Expression Associated With Resistance to Concomitant Chemoradiotherapy in Glioblastoma

(2008) Anastasia Murat et al.   JOURNAL OF CLINICAL ONCOLOGY

Comprehensive genomic characterization defines human glioblastoma genes and core pathways

(2008) Roger McLendon et al.   NATURE

Taming the PI3K team to hold inflammation and cancer at bay

(2008) Emilio Hirsch et al.   PHARMACOLOGY & THERAPEUTICS

Functional Copy-Number Alterations in Cancer

(2008) Barry S. Taylor et al.   PLoS One