Binding Leverage as a Molecular Basis for Allosteric Regulation

On the role of frustration in the energy landscapes of allosteric proteins

(2011) Diego U. Ferreiro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global Dynamics of Proteins: Bridging Between Structure and Function

(2010) Ivet Bahar et al.   Annual Review of Biophysics

Substrate-Modulated Thermal Fluctuations Affect Long-Range Allosteric Signaling in Protein Homodimers: Exemplified in CAP

(2010) Hedvika Toncrova et al.   BIOPHYSICAL JOURNAL

Many Local Motions Cooperate to Produce the Adenylate Kinase Conformational Transition

(2010) Michael D. Daily et al.   JOURNAL OF MOLECULAR BIOLOGY

Dynamics connect substrate recognition to catalysis in protein kinase A

(2010) Larry R Masterson et al.   Nature Chemical Biology

A geometry-based generic predictor for catalytic and allosteric sites

(2010) S. Mitternacht et al.   PROTEIN ENGINEERING DESIGN & SELECTION

Novel Inhibitors Complexed with Glutamate Dehydrogenase

(2009) Ming Li et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Conformational selection or induced fit: A flux description of reaction mechanism

(2009) G. G. Hammes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sending Signals Dynamically

(2009) R. G. Smock et al.   SCIENCE

The Origin of Allosteric Functional Modulation: Multiple Pre-existing Pathways

(2009) Antonio del Sol et al.   STRUCTURE

Perturbation-Response Scanning Reveals Ligand Entry-Exit Mechanisms of Ferric Binding Protein

(2009) Canan Atilgan et al.   PLoS Computational Biology

Detection of protein catalytic residues at high precision using local network properties

(2008) Patrick Slama et al.   BMC BIOINFORMATICS

Tryptophan synthase, an allosteric molecular factory

(2008) Thomas RM Barends et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Allostery Wiring Diagrams in the Transitions that Drive the GroEL Reaction Cycle

(2008) Riina Tehver et al.   JOURNAL OF MOLECULAR BIOLOGY

Allosteric regulation and catalysis emerge via a common route

(2008) Nina M Goodey et al.   Nature Chemical Biology

Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms

(2008) K.-i. Okazaki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Allosteric cooperativity in protein kinase A

(2008) L. R. Masterson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Allostery and cooperativity revisited

(2008) Qiang Cui et al.   PROTEIN SCIENCE

Untangling the glutamate dehydrogenase allosteric nightmare

(2008) Thomas J. Smith et al.   TRENDS IN BIOCHEMICAL SCIENCES