Quantitative Comparison of Catalytic Mechanisms and Overall Reactions in Convergently Evolved Enzymes: Implications for Classification of Enzyme Function

Metal-MACiE: a database of metals involved in biological catalysis

(2009) Claudia Andreini et al.   BIOINFORMATICS

E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs

(2009) Y. Yamanishi et al.   BIOINFORMATICS

Investigations of Enzyme-Catalyzed Reactions Based on Physicochemical Descriptors Applied to Hydrolases

(2009) Oliver Sacher et al.   Journal of Chemical Information and Modeling

Assignment of EC Numbers to Enzymatic Reactions with MOLMAP Reaction Descriptors and Random Forests

(2009) Diogo A. R. S. Latino et al.   Journal of Chemical Information and Modeling

Theoretical Study of the Reaction Mechanism of Streptomyces coelicolor Type II Dehydroquinase

(2009) L. Mattias Blomberg et al.   Journal of Chemical Theory and Computation

Protein function annotation by homology-based inference

(2009) Yaniv Loewenstein et al.   GENOME BIOLOGY

Genome-scale classification of metabolic reactions and assignment of EC numbers with self-organizing maps

(2008) Diogo A. R. S. Latino et al.   BIOINFORMATICS

AnEnPi: Identification and annotation of analogous enzymes

(2008) Thomas D Otto et al.   BMC BIOINFORMATICS

Metal ions in biological catalysis: from enzyme databases to general principles

(2008) Claudia Andreini et al.   JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY

De Novo Computational Design of Retro-Aldol Enzymes

(2008) L. Jiang et al.   SCIENCE

Evolutionarily Conserved Substrate Substructures for Automated Annotation of Enzyme Superfamilies

(2008) Ranyee A. Chiang et al.   PLoS Computational Biology