Cooperativity Dominates the Genomic Organization of p53-Response Elements: A Mechanistic View

Dimerization of the core domain of the p53 family: A computational study

(2011) Arumugam Madhumalar et al.   CELL CYCLE

Folding and binding cascades: Dynamic landscapes and population shifts

(2010) Sandeep Kumar et al.   PROTEIN SCIENCE

Structural biology of the p53 tumour suppressor

(2009) Andrei L Okorokov et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Protein allostery, signal transmission and dynamics: a classification scheme of allosteric mechanisms

(2009) Chung-Jung Tsai et al.   Molecular BioSystems

Allostery: DNA Does It, Too

(2008) Jonathan B. Chaires   ACS Chemical Biology

Structural Biology of the Tumor Suppressor p53

(2008) Andreas C. Joerger et al.   Annual Review of Biochemistry

Conformational Switching upon Phosphorylation:  A Predictive Framework Based on Energy Landscape Principles

(2008) Joachim Lätzer et al.   BIOCHEMISTRY

Molecular dynamics simulations of nucleic acid–protein complexes

(2008) Alexander D MacKerell et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Structure of a Construct of a Human Poly(C)-binding Protein Containing the First and Second KH Domains Reveals Insights into Its Regulatory Mechanisms

(2008) Zhihua Du et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Allostery: Absence of a Change in Shape Does Not Imply that Allostery Is Not at Play

(2008) Chung-Jung Tsai et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural Basis of Restoring Sequence-Specific DNA Binding and Transactivation to Mutant p53 by Suppressor Mutations

(2008) Oded Suad et al.   JOURNAL OF MOLECULAR BIOLOGY

p53-Induced DNA Bending: The Interplay between p53−DNA and p53−p53 Interactions

(2008) Yongping Pan et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The plasticity of estrogen receptor–DNA complexes: Binding affinity and specificity of estrogen receptors to estrogen response element half-sites separated by variant spacers

(2008) S. El Marzouk et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Analysis of combinatorial cis-regulation in synthetic and genomic promoters

(2008) Jason Gertz et al.   NATURE

Transcriptional control of human p53-regulated genes

(2008) Todd Riley et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Characterization of genome-wide p53-binding sites upon stress response

(2008) Leonie Smeenk et al.   NUCLEIC ACIDS RESEARCH

Discovery of novel tumor suppressor p53 response elements using information theory

(2008) Ilya G. Lyakhov et al.   NUCLEIC ACIDS RESEARCH

Algorithm for prediction of tumour suppressor p53 affinity for binding sites in DNA

(2008) Dmitry B. Veprintsev et al.   NUCLEIC ACIDS RESEARCH

A high-throughput percentage-of-binding strategy to measure binding energies in DNA–protein interactions: application to genome-scale site discovery

(2008) Xiaohu Wang et al.   NUCLEIC ACIDS RESEARCH

Crystal structure of a p53 core tetramer bound to DNA

(2008) K A Malecka et al.   ONCOGENE

Mechanisms of regulatory diversity within the p53 transcriptional network

(2008) J M Espinosa   ONCOGENE

DNA energy landscapes via calorimetric detection of microstate ensembles of metastable macrostates and triplet repeat diseases

(2008) J. Volker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Allostery and cooperativity revisited

(2008) Qiang Cui et al.   PROTEIN SCIENCE

Selected-fit versus induced-fit protein binding: Kinetic differences and mutational analysis

(2008) Thomas R. Weikl et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

BIOCHEMISTRY: How Do Proteins Interact?

(2008) D. D. Boehr et al.   SCIENCE

Recognition Dynamics Up to Microseconds Revealed from an RDC-Derived Ubiquitin Ensemble in Solution

(2008) O. F. Lange et al.   SCIENCE

Noncanonical DNA Motifs as Transactivation Targets by Wild Type and Mutant p53

(2008) Jennifer J. Jordan et al.   PLoS Genetics