CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms

Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing

(2012) Ramiro Logares et al.   ISME Journal

An emergent science on the brink of irrelevance: a review of the past 8 years of DNA barcoding

(2012) H. R. TAYLOR et al.   Molecular Ecology Resources

Evaluating the Ribosomal Internal Transcribed Spacer (ITS) as a Candidate Dinoflagellate Barcode Marker

(2012) Rowena F. Stern et al.   PLoS One

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins

(2012) F. Burki et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bacterial species may exist, metagenomics reveal

(2011) Alejandro Caro-Quintero et al.   ENVIRONMENTAL MICROBIOLOGY

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

(2011) Virginia Edgcomb et al.   ISME Journal

Survey of the Efficacy of a Short Fragment of the rbcL Gene as a Supplemental DNA Barcode for Diatoms

(2011) Michael L. MacGillivary et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

NEW EVIDENCE FOR MORPHOLOGICAL AND GENETIC VARIATION IN THE COSMOPOLITAN COCCOLITHOPHORE EMILIANIA HUXLEYI (PRYMNESIOPHYCEAE) FROM THE COX1b-ATP4 GENES1

(2011) Kyoko Hagino et al.   JOURNAL OF PHYCOLOGY

DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer

(2011) GREGG P. ROBIDEAU et al.   Molecular Ecology Resources

Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols

(2011) Jonas Zimmermann et al.   ORGANISMS DIVERSITY & EVOLUTION

Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments

(2011) Béatrice Lecroq et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Newly identified and diverse plastid-bearing branch on the eukaryotic tree of life

(2011) E. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Barcoding Diatoms: Exploring Alternatives to COI-5P

(2011) Sarah E. Hamsher et al.   PROTIST

Emerging Diversity within Chrysophytes, Choanoflagellates and Bicosoecids Based on Molecular Surveys

(2011) Javier del Campo et al.   PROTIST

COI Barcoding of Nebelid Testate Amoebae (Amoebozoa: Arcellinida): Extensive Cryptic Diversity and Redefinition of the Hyalospheniidae Schultze

(2011) Anush Kosakyan et al.   PROTIST

Molecular Phylogeny and Morphological Evolution of the Acantharia (Radiolaria)

(2011) Johan Decelle et al.   PROTIST

How Many Species Are There on Earth and in the Ocean?

(2011) Camilo Mora et al.   PLOS BIOLOGY

Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions

(2010) Anke Behnke et al.   ENVIRONMENTAL MICROBIOLOGY

The use of partialcox1,rbcL and LSU rDNA sequences for phylogenetics and species identification within theNitzschia paleaspecies complex (Bacillariophyceae)

(2010) Rosa Trobajo et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Short rDNA Barcodes for Species Identification in Foraminifera

(2010) JAN PAWLOWSKI et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

DNA BARCODING OF CHLORARACHNIOPHYTES USING NUCLEOMORPH ITS SEQUENCES1

(2010) Gillian H. Gile et al.   JOURNAL OF PHYCOLOGY

DNA BARCODING IS A POWERFUL TOOL TO UNCOVER ALGAL DIVERSITY: A CASE STUDY OF THE PHYLLOPHORACEAE (GIGARTINALES, RHODOPHYTA) IN THE CANADIAN FLORA

(2010) Line Le Gall et al.   JOURNAL OF PHYCOLOGY

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

Environmental Barcoding Reveals Massive Dinoflagellate Diversity in Marine Environments

(2010) Rowena F. Stern et al.   PLoS One

Comparing Potential COI and SSU rDNA Barcodes for Assessing the Diversity and Phylogenetic Relationships of Cyphoderiid Testate Amoebae (Rhizaria: Euglyphida)

(2010) Thierry J. Heger et al.   PROTIST

High-Level Genetic Diversity but No Population Structure Inferred from Nuclear and Mitochondrial Markers of the Peritrichous Ciliate Carchesium polypinum in the Grand River Basin (North America)

(2009) E. Gentekaki et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Probing into the diversity of trypanosomatid flagellates parasitizing insect hosts in South-West China reveals both endemism and global dispersal

(2009) Jan Votýpka et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans

(2009) H. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Barcoding Amoebae: Comparison of SSU, ITS and COI Genes as Tools for Molecular Identification of Naked Lobose Amoebae

(2009) Elena Nassonova et al.   PROTIST

Barcoding of Diatoms: Nuclear Encoded ITS Revisited

(2009) Mónica B.J. Moniz et al.   PROTIST

Assigning morphological variants of Fucus (Fucales, Phaeophyceae) in Canadian waters to recognized species using DNA barcoding

(2008) Hana Kucera et al.   Botany

A DNA barcode examination of the red algal family Dumontiaceae in Canadian waters reveals substantial cryptic species diversity. 1. The foliose Dilsea–Neodilsea complex and WeeksiaThis paper is one of a selection of papers published in the Special Issue on Systematics Research.

(2008) Gary W. Saunders   Botany