Ultrasensitive response motifs: basic amplifiers in molecular signalling networks
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Title
Ultrasensitive response motifs: basic amplifiers in molecular signalling networks
Authors
Keywords
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Journal
Open Biology
Volume 3, Issue 4, Pages 130031-130031
Publisher
The Royal Society
Online
2013-04-25
DOI
10.1098/rsob.130031
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Note: Only part of the references are listed.- Realistic enzymology for post-translational modification: Zero-order ultrasensitivity revisited
- (2012) Yangqing Xu et al. JOURNAL OF THEORETICAL BIOLOGY
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- (2011) Mardo Kõivomägi et al. NATURE
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- (2011) Shankar Mukherji et al. NATURE GENETICS
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- (2011) Dirk De Vos et al. PLoS One
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- (2011) Francesco Ricci et al. PLoS Computational Biology
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- (2011) Dan Siegal-Gaskins et al. PLoS Computational Biology
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- (2011) Najaf A. Shah et al. PLoS Computational Biology
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- (2010) Kim Sneppen et al. Annual Review of Biophysics
- Functional Motifs in Biochemical Reaction Networks
- (2010) John J. Tyson et al. Annual Review of Physical Chemistry
- Hypoxia-dependent sequestration of an oxygen sensor by a widespread structural motif can shape the hypoxic response - a predictive kinetic model
- (2010) Bernhard Schmierer et al. BMC Systems Biology
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- (2010) Savaş Tay et al. NATURE
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- (2010) Mohan K. Malleshaiah et al. NATURE
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- (2010) A. C. Ventura et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2009) Lan K Nguyen et al. BMC Systems Biology
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- (2009) Carlos Salazar et al. FEBS Journal
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- (2009) Harish Shankaran et al. Molecular Systems Biology
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- (2009) Nicolas E Buchler et al. Molecular Systems Biology
- An internal ribosomal entry site mediates redox-sensitive translation of Nrf2
- (2009) Wenge Li et al. NUCLEIC ACIDS RESEARCH
- Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression
- (2009) D. Nevozhay et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2009) Gwendowlyn S. Knapp et al. PROTEIN SCIENCE
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