4.5 Article

Discrimination of rice genotypes using field spectroradiometry

Journal

GEOCARTO INTERNATIONAL
Volume 35, Issue 1, Pages 64-77

Publisher

TAYLOR & FRANCIS LTD
DOI: 10.1080/10106049.2018.1506507

Keywords

Genotype discrimination; spectral separability; classification and regression tree analysis; Jeffries– Matusita distance; quadratic discriminant analysis

Funding

  1. CSIR, New Delhi, India [18-12/2011 (ii) EU-V]
  2. National Agriculture Science Fund (NASF), ICAR [NASF(ICAR)-Phen 2015/2011-12]

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Spectral discrimination of rice genotypes was investigated using canopy reflectance in the range of 350 to 2500 nm. The pre-processed reflectance spectra were statistically analysed using one-way analysis of variance (ANOVA) followed by classification and regression tree (CART) technique to find significantly sensitive wavelengths for discrimination. The CART was able to select seventeen wavelengths (4 in visible, 5 in near-infra-red and 8 in shortwave infra-red region) well distributed over the entire spectrum. The spectral separability between each pair of rice genotypes at the selected wavebands was quantified using Jeffries-Matusita (J-M) distance analysis. The J-M distance analysis taking 91 pairs of genotypes showed that all the pairs were separable. This result was further validated by quadratic discriminant analysis (QDA) with an overall accuracy of 98%. The variation in biophysical and biochemical attributes of genotypes has been captured through differential spectral reflectance at selected wavebands which could make the discrimination possible.

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