Identification and functional validation of HPV-mediated hypermethylation in head and neck squamous cell carcinoma

Epigenetic reprogramming of cancer cells via targeted DNA methylation

(2012) Ashley G. Rivenbark et al.   Epigenetics

Selective DNA demethylation by fusion of TDG with a sequence-specific DNA-binding domain

(2012) David J. Gregory et al.   Epigenetics

Genome-scale analysis of DNA methylation in lung adenocarcinoma and integration with mRNA expression

(2012) S. A. Selamat et al.   GENOME RESEARCH

The Dynamics and Prognostic Potential of DNA Methylation Changes at Stem Cell Gene Loci in Women's Cancer

(2012) Joanna Zhuang et al.   PLoS Genetics

Resources for methylome analysis suitable for gene knockout studies of potential epigenome modifiers

(2012) Gareth A Wilson et al.   GigaScience

Independent surrogate variable analysis to deconvolve confounding factors in large-scale microarray profiling studies

(2011) Andrew E. Teschendorff et al.   BIOINFORMATICS

Evaluation of Human Papilloma Virus Diagnostic Testing in Oropharyngeal Squamous Cell Carcinoma: Sensitivity, Specificity, and Prognostic Discrimination

(2011) A. G. Schache et al.   CLINICAL CANCER RESEARCH

Genome-wide methylation and expression differences in HPV(+) and HPV(-) squamous cell carcinoma cell lines are consistent with divergent mechanisms of carcinogenesis

(2011) Maureen A. Sartor et al.   Epigenetics

High density DNA methylation array with single CpG site resolution

(2011) Marina Bibikova et al.   GENOMICS

Evaluation of human papillomavirus testing for squamous cell carcinoma of the tonsil in clinical practice

(2011) S. Thavaraj et al.   JOURNAL OF CLINICAL PATHOLOGY

The Mutational Landscape of Head and Neck Squamous Cell Carcinoma

(2011) N. Stransky et al.   SCIENCE

Breast Cancer Methylomes Establish an Epigenomic Foundation for Metastasis

(2011) F. Fang et al.   Science Translational Medicine

Evaluation of the Infinium Methylation 450K technology

(2011) Sarah Dedeurwaerder et al.   Epigenomics

Identification of Type 1 Diabetes–Associated DNA Methylation Variable Positions That Precede Disease Diagnosis

(2011) Vardhman K. Rakyan et al.   PLoS Genetics

Genome-wide DNA methylation analysis for diabetic nephropathy in type 1 diabetes mellitus

(2010) Christopher G Bell et al.   BMC Medical Genomics

Identification of a CpG Island Methylator Phenotype that Defines a Distinct Subgroup of Glioma

(2010) Houtan Noushmehr et al.   CANCER CELL

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

(2010) L. Chavez et al.   GENOME RESEARCH

AutoMeDIP-seq: A high-throughput, whole genome, DNA methylation assay

(2010) Lee M. Butcher et al.   METHODS

Genome-wide DNA methylation analysis of archival formalin-fixed paraffin-embedded tissue using the Illumina Infinium HumanMethylation27 BeadChip

(2010) Christina Thirlwell et al.   METHODS

Viral epigenomes in human tumorigenesis

(2010) A F Fernandez et al.   ONCOGENE

Epigenetic reprogramming of host genes in viral and microbial pathogenesis

(2010) Konstantinos Paschos et al.   TRENDS IN MICROBIOLOGY

Human Papillomavirus and Head and Neck Cancer

(2009) William M. Mendenhall et al.   AMERICAN JOURNAL OF CLINICAL ONCOLOGY-CANCER CLINICAL TRIALS

Genomewide Gene Expression Profiles of HPV-Positive and HPV-Negative Oropharyngeal Cancer

(2009) Pawadee Lohavanichbutr et al.   ARCHIVES OF OTOLARYNGOLOGY-HEAD & NECK SURGERY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Human Papillomavirus and Oropharyngeal Cancer: What You Need to Know in 2009

(2009) M. Boyd Gillespie et al.   CURRENT TREATMENT OPTIONS IN ONCOLOGY

Genome-Wide Hypomethylation in Head and Neck Cancer Is More Pronounced in HPV-Negative Tumors and Is Associated with Genomic Instability

(2009) Kristy L. Richards et al.   PLoS One

An Epigenetic Signature in Peripheral Blood Predicts Active Ovarian Cancer

(2009) Andrew E. Teschendorff et al.   PLoS One

Involvement of Members of the Cadherin Superfamily in Cancer

(2009) G. Berx et al.   Cold Spring Harbor Perspectives in Biology

Marked differences in survival rate between smokers and nonsmokers with HPV 16-associated tonsillar carcinomas

(2008) Harriët C. Hafkamp et al.   INTERNATIONAL JOURNAL OF CANCER

Improved Survival of Patients With Human Papillomavirus-Positive Head and Neck Squamous Cell Carcinoma in a Prospective Clinical Trial

(2008) C. Fakhry et al.   JNCI-Journal of the National Cancer Institute

Global epidemiology of oral and oropharyngeal cancer

(2008) Saman Warnakulasuriya   ORAL ONCOLOGY