Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets
Published 2012 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets
Authors
Keywords
-
Journal
Genome Medicine
Volume 4, Issue 5, Pages 41
Publisher
Springer Nature
Online
2012-05-02
DOI
10.1186/gm340
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- From pharmacogenomic knowledge acquisition to clinical applications: the PharmGKB as a clinical pharmacogenomic biomarker resource
- (2011) Ellen M McDonagh et al. Biomarkers in Medicine
- Systems Biology: Confronting the Complexity of Cancer
- (2011) A. J. Gentles et al. CANCER RESEARCH
- Principles and Strategies for Developing Network Models in Cancer
- (2011) Dana Pe'er et al. CELL
- Hallmarks of Cancer: The Next Generation
- (2011) Douglas Hanahan et al. CELL
- Vimentin in cancer and its potential as a molecular target for cancer therapy
- (2011) Arun Satelli et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Upregulated stromal EGFR and vascular remodeling in mouse xenograft models of angiogenesis inhibitor–resistant human lung adenocarcinoma
- (2011) Tina Cascone et al. JOURNAL OF CLINICAL INVESTIGATION
- Bioinformatic detection of E47, E2F1 and SREBP1 transcription factors as potential regulators of genes associated to acquisition of endometrial receptivity
- (2011) Alejandro Tapia et al. Reproductive Biology and Endocrinology
- Revealing differences in gene network inference algorithms on the network level by ensemble methods
- (2010) Gökmen Altay et al. BIOINFORMATICS
- Comparison of evolutionary algorithms in gene regulatory network model inference
- (2010) Alina Sîrbu et al. BMC BIOINFORMATICS
- Gene expression profiling supports the hypothesis that human ovarian surface epithelia are multipotent and capable of serving as ovarian cancer initiating cells
- (2010) Nathan J Bowen et al. BMC Medical Genomics
- Regulation of Vascular Endothelial Growth Factor Receptors by Rb and E2F1: Role of Acetylation
- (2010) Smitha Pillai et al. CANCER RESEARCH
- Polymorphisms in genes hydroxysteroid-dehydrogenase-17b type 2 and type 4 and endometrial cancer risk
- (2010) Stalo Karageorgi et al. GYNECOLOGIC ONCOLOGY
- Cell Fate Determination Factor Dachshund Reprograms Breast Cancer Stem Cell Function
- (2010) Kongming Wu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Network medicine: a network-based approach to human disease
- (2010) Albert-László Barabási et al. NATURE REVIEWS GENETICS
- CancerResource: a comprehensive database of cancer-relevant proteins and compound interactions supported by experimental knowledge
- (2010) Jessica Ahmed et al. NUCLEIC ACIDS RESEARCH
- Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges
- (2010) Robert J. Prill et al. PLoS One
- Inferring Regulatory Networks from Expression Data Using Tree-Based Methods
- (2010) Vân Anh Huynh-Thu et al. PLoS One
- Revealing strengths and weaknesses of methods for gene network inference
- (2010) D. Marbach et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- From ‘differential expression’ to ‘differential networking’ – identification of dysfunctional regulatory networks in diseases
- (2010) Alberto de la Fuente TRENDS IN GENETICS
- Inferring Gene Networks: Dream or Nightmare?
- (2009) Alan Scheinine et al. Annals of the New York Academy of Sciences
- Inferring Gene Networks: Dream or Nightmare?
- (2009) Angela Baralla et al. Annals of the New York Academy of Sciences
- Lessons from the DREAM2 Challenges
- (2009) Gustavo Stolovitzky et al. Annals of the New York Academy of Sciences
- e2f1 gene is a new member of Wnt/β-catenin/Tcf-regulated genes
- (2009) Maria V. Abramova et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- GeNGe: systematic generation of gene regulatory networks
- (2009) Hendrik Hache et al. BIOINFORMATICS
- The basics of epithelial-mesenchymal transition
- (2009) Raghu Kalluri et al. JOURNAL OF CLINICAL INVESTIGATION
- Generating Realistic In Silico Gene Networks for Performance Assessment of Reverse Engineering Methods
- (2009) Daniel Marbach et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Dual Role of Sp3 Transcription Factor as an Inducer of Apoptosis and a Marker of Tumour Aggressiveness
- (2009) Khadija Essafi-Benkhadir et al. PLoS One
- Fast network component analysis (FastNCA) for gene regulatory network reconstruction from microarray data
- (2008) C. Chang et al. BIOINFORMATICS
- SIRENE: supervised inference of regulatory networks
- (2008) F. Mordelet et al. BIOINFORMATICS
- Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks
- (2008) Antonio Reverter et al. BIOINFORMATICS
- Supervised inference of gene-regulatory networks
- (2008) Cuong C To et al. BMC BIOINFORMATICS
- minet: A R/Bioconductor Package for Inferring Large Transcriptional Networks Using Mutual Information
- (2008) Patrick E Meyer et al. BMC BIOINFORMATICS
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
- Novel Molecular Subtypes of Serous and Endometrioid Ovarian Cancer Linked to Clinical Outcome
- (2008) R. W. Tothill et al. CLINICAL CANCER RESEARCH
- E2F1 represses β-catenin/TCF activity by direct up-regulation of Siah1
- (2008) Wei Xie et al. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
- Modelling and analysis of gene regulatory networks
- (2008) Guy Karlebach et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
- (2008) Da Wei Huang et al. NUCLEIC ACIDS RESEARCH
- Fibrinogen-like protein 2/fibroleukin prothrombinase contributes to tumor hypercoagulability via IL-2 and IFN-γ
- (2008) Kai Su et al. WORLD JOURNAL OF GASTROENTEROLOGY
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started