Small RNA-mediated regulation of host–pathogen interactions

Counting Small RNA in Pathogenic Bacteria

(2013) Douglas P. Shepherd et al.   ANALYTICAL CHEMISTRY

miRNA profiling of cancer

(2013) Gianpiero Di Leva et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Global Small RNA Chaperone Hfq and Regulatory Small RNAs Are Important Virulence Regulators in Erwinia amylovora

(2013) Q. Zeng et al.   JOURNAL OF BACTERIOLOGY

Host microRNA molecular signatures associated with human H1N1 and H3N2 influenza A viruses reveal an unanticipated antiviral activity for miR-146a

(2013) O. Terrier et al.   JOURNAL OF GENERAL VIROLOGY

Identification and characterization of small RNAs inYersinia pestis

(2013) Arthur Beauregard et al.   RNA Biology

Transgenerational gene silencing causes gain of virulence in a plant pathogen

(2013) Dinah Qutob et al.   Nature Communications

Identification by cDNA cloning of abundant sRNAs in a human-avirulent Yersinia pestis strain grown under five different growth conditions

(2012) Yi Qu et al.   Future Microbiology

Enhanced Susceptibility to Citrobacter rodentium Infection in MicroRNA-155-Deficient Mice

(2012) Simon Clare et al.   INFECTION AND IMMUNITY

microRNA Response to Listeria monocytogenes Infection in Epithelial Cells

(2012) Benjamin Izar et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Respiratory syncytial virus modifies microRNAs regulating host genes that affect virus replication

(2012) A. Bakre et al.   JOURNAL OF GENERAL VIROLOGY

Micro-RNA 155 Is Required for Optimal CD8+ T Cell Responses to Acute Viral and Intracellular Bacterial Challenges

(2012) E. F. Lind et al.   JOURNAL OF IMMUNOLOGY

miR-451 Regulates Dendritic Cell Cytokine Responses to Influenza Infection

(2012) C. M. Rosenberger et al.   JOURNAL OF IMMUNOLOGY

Identification of two small regulatory RNAs linked to virulence in Brucella abortus 2308

(2012) Clayton C. Caswell et al.   MOLECULAR MICROBIOLOGY

Differential activation and functional specialization of miR-146 and miR-155 in innate immune sensing

(2012) Leon N. Schulte et al.   NUCLEIC ACIDS RESEARCH

Serum MicroRNA Signatures Identified by Solexa Sequencing Predict Sepsis Patients’ Mortality: A Prospective Observational Study

(2012) Huijuan Wang et al.   PLoS One

Identification of a Novel Small RNA Modulating Francisella tularensis Pathogenicity

(2012) Guillaume Postic et al.   PLoS One

RNA virus microRNA that mimics a B-cell oncomiR

(2012) R. P. Kincaid et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Control of Virulence by Small RNAs in Streptococcus pneumoniae

(2012) Beth Mann et al.   PLoS Pathogens

Analysis of the host microRNA response toSalmonellauncovers the control of major cytokines by thelet-7family

(2011) Leon N Schulte et al.   EMBO JOURNAL

The Second RNA Chaperone, Hfq2, Is Also Required for Survival under Stress and Full Virulence of Burkholderia cenocepacia J2315

(2011) C. G. Ramos et al.   JOURNAL OF BACTERIOLOGY

MicroRNA-155 Is Essential for the T Cell-Mediated Control of Helicobacter pylori Infection and for the Induction of Chronic Gastritis and Colitis

(2011) M. Oertli et al.   JOURNAL OF IMMUNOLOGY

Regulation by Small RNAs in Bacteria: Expanding Frontiers

(2011) Gisela Storz et al.   MOLECULAR CELL

Current prospects for RNA interference-based therapies

(2011) Beverly L. Davidson et al.   NATURE REVIEWS GENETICS

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

(2011) Cornelius Schmidtke et al.   NUCLEIC ACIDS RESEARCH

Deep sequencing of virus-infected cells reveals HIV-encoded small RNAs

(2011) N. C. T. Schopman et al.   NUCLEIC ACIDS RESEARCH

sTarPicker: A Method for Efficient Prediction of Bacterial sRNA Targets Based on a Two-Step Model for Hybridization

(2011) Xiaomin Ying et al.   PLoS One

Comparative miRNA Expression Profiles in Individuals with Latent and Active Tuberculosis

(2011) Chuan Wang et al.   PLoS One

Listeria monocytogenes Infection in Macrophages Induces Vacuolar-Dependent Host miRNA Response

(2011) Anna K. D. Schnitger et al.   PLoS One

Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence

(2011) J. T. Koo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mycobacterium tuberculosis lipomannan blocks TNF biosynthesis by regulating macrophage MAPK-activated protein kinase 2 (MK2) and microRNA miR-125b

(2011) M. V. S. Rajaram et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Viral Small Interfering RNAs Target Host Genes to Mediate Disease Symptoms in Plants

(2011) Neil A. Smith et al.   PLoS Pathogens

A Viral Satellite RNA Induces Yellow Symptoms on Tobacco by Targeting a Gene Involved in Chlorophyll Biosynthesis using the RNA Silencing Machinery

(2011) Hanako Shimura et al.   PLoS Pathogens

MicroRNA signatures in Helicobacter pylori-infected gastric mucosa

(2010) Kayoko Matsushima et al.   INTERNATIONAL JOURNAL OF CANCER

MicroRNA Expression and Virulence in Pandemic Influenza Virus-Infected Mice

(2010) Y. Li et al.   JOURNAL OF VIROLOGY

miRBase: integrating microRNA annotation and deep-sequencing data

(2010) A. Kozomara et al.   NUCLEIC ACIDS RESEARCH

Helicobacter pylori Induces miR-155 in T Cells in a cAMP-Foxp3-Dependent Manner

(2010) Lina Fassi Fehri et al.   PLoS One

Influenza A virus-generated small RNAs regulate the switch from transcription to replication

(2010) J. T. Perez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

sRNATarBase: A comprehensive database of bacterial sRNA targets verified by experiments

(2010) Y. Cao et al.   RNA

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

(2010) Y. Taniguchi et al.   SCIENCE

Six RNA Viruses and Forty-One Hosts: Viral Small RNAs and Modulation of Small RNA Repertoires in Vertebrate and Invertebrate Systems

(2010) Poornima Parameswaran et al.   PLoS Pathogens

The Biology of Viroid-Host Interactions

(2009) Biao Ding   Annual Review of Phytopathology

Regulatory RNAs in Bacteria

(2009) Lauren S. Waters et al.   CELL

Foxp3-Dependent MicroRNA155 Confers Competitive Fitness to Regulatory T Cells by Targeting SOCS1 Protein

(2009) Li-Fan Lu et al.   IMMUNITY

Hfq, a Novel Pleiotropic Regulator of Virulence-Associated Genes in Francisella tularensis

(2009) K. L. Meibom et al.   INFECTION AND IMMUNITY

Cutting Edge: The Foxp3 Target miR-155 Contributes to the Development of Regulatory T Cells

(2009) S. Kohlhaas et al.   JOURNAL OF IMMUNOLOGY

Induction of microRNA‐155 duringHelicobacter pyloriInfection and Its Negative Regulatory Role in the Inflammatory Response

(2009) Bin Xiao et al.   JOURNAL OF INFECTIOUS DISEASES

Cellular MicroRNA and P Bodies Modulate Host-HIV-1 Interactions

(2009) Robin Nathans et al.   MOLECULAR CELL

Characterization of homologs of the small RNA SgrS reveals diversity in function

(2009) Caryn S. Wadler et al.   NUCLEIC ACIDS RESEARCH

Involvement of the Post-Transcriptional Regulator Hfq in Yersinia pestis Virulence

(2009) Jing Geng et al.   PLoS One

MiR-155 Induction by F. novicida but Not the Virulent F. tularensis Results in SHIP Down-Regulation and Enhanced Pro-Inflammatory Cytokine Response

(2009) Thomas J. Cremer et al.   PLoS One

MicroRNA-155 modulates the interleukin-1 signaling pathway in activated human monocyte-derived dendritic cells

(2009) Maurizio Ceppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing

(2009) D. R. Yoder-Himes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

E2F1-Regulated MicroRNAs Impair TGFβ-Dependent Cell-Cycle Arrest and Apoptosis in Gastric Cancer

(2008) Fabio Petrocca et al.   CANCER CELL

Most mammalian mRNAs are conserved targets of microRNAs

(2008) R. C. Friedman et al.   GENOME RESEARCH

RNAi suppressors encoded by pathogenic human viruses

(2008) Walter de Vries et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

miR-21 plays a pivotal role in gastric cancer pathogenesis and progression

(2008) Zhiyu Zhang et al.   LABORATORY INVESTIGATION

A Csr-type regulatory system, including small non-coding RNAs, regulates the global virulence regulator RovA of Yersinia pseudotuberculosis through RovM

(2008) Ann Kathrin Heroven et al.   MOLECULAR MICROBIOLOGY

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

(2008) Witold Filipowicz et al.   NATURE REVIEWS GENETICS

Dispatched Homolog 2 is targeted by miR-214 through a combination of three weak microRNA recognition sites

(2008) N. Li et al.   NUCLEIC ACIDS RESEARCH

TargetRNA: a tool for predicting targets of small RNA action in bacteria

(2008) B. Tjaden   NUCLEIC ACIDS RESEARCH

Deep Sequencing Analysis of Small Noncoding RNA and mRNA Targets of the Global Post-Transcriptional Regulator, Hfq

(2008) Alexandra Sittka et al.   PLoS Genetics