Genome analysis of Desulfotomaculum gibsoniae strain GrollT a highly versatile Gram-positive sulfate-reducing bacterium

Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DLT)

(2013) Stefan Spring et al.   Standards in Genomic Sciences

Complete genome, catabolic sub-proteomes and key-metabolites ofDesulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium

(2012) Lars Wöhlbrand et al.   ENVIRONMENTAL MICROBIOLOGY

Identification and Characterization of a Succinyl-Coenzyme A (CoA):Benzoate CoA Transferase in Geobacter metallireducens

(2012) J. Oberender et al.   JOURNAL OF BACTERIOLOGY

The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation

(2012) Konstantinos Mavromatis et al.   PLoS One

Microbial degradation of aromatic compounds — from one strategy to four

(2011) Georg Fuchs et al.   NATURE REVIEWS MICROBIOLOGY

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

(2011) I. Pagani et al.   NUCLEIC ACIDS RESEARCH

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Occurrence, genes and expression of the W/Se-containing class II benzoyl-coenzyme A reductases in anaerobic bacteria

(2010) Claudia Löffler et al.   ENVIRONMENTAL MICROBIOLOGY

List of new names and new combinations previously effectively, but not validly, published

(2010)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

(2010) Amrita Pati et al.   NATURE METHODS

Phenol Degradation in the Strictly Anaerobic Iron-Reducing Bacterium Geobacter metallireducens GS-15

(2009) K. M. Schleinitz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

IMG ER: a system for microbial genome annotation expert review and curation

(2009) Victor M. Markowitz et al.   BIOINFORMATICS

Identification and characterization of the tungsten-containing class of benzoyl-coenzyme A reductases

(2009) J. W. Kung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Substrate-dependent transcriptomic shifts inPelotomaculum thermopropionicumgrown in syntrophic co-culture withMethanothermobacter thermautotrophicus

(2009) Souichiro Kato et al.   Microbial Biotechnology

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

(2009) Konstantinos Mavromatis et al.   Standards in Genomic Sciences

Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575T)

(2009) Stefan Spring et al.   Standards in Genomic Sciences

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The minimum information about a genome sequence (MIGS) specification

(2008) Dawn Field et al.   NATURE BIOTECHNOLOGY

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH