Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage

Emergence of an exotic strain of serotype O foot-and-mouth disease virus O/ME-SA/Ind-2001d in South-East Asia in 2015

(2017) Y. Qiu et al.   Transboundary and Emerging Diseases

SpreaD3: Interactive Visualization of Spatiotemporal History and Trait Evolutionary Processes

(2016) Filip Bielejec et al.   MOLECULAR BIOLOGY AND EVOLUTION

VP1 sequencing protocol for foot and mouth disease virus molecular epidemiology

(2016) N.J. KNOWLES et al.   REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference

(2016) Michael D. Karcher et al.   PLoS Computational Biology

Evolutionary dynamics of foot-and-mouth disease virus O/ME-SA/Ind2001 lineage

(2015) Saravanan Subramaniam et al.   VETERINARY MICROBIOLOGY

New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation

(2015) Nicola De Maio et al.   PLoS Genetics

A universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeq

(2014) Grace Logan et al.   BMC GENOMICS

Molecular Characterization of Foot-and-Mouth Disease Viruses Collected in Tanzania Between 1967 and 2009

(2014) C. J. Kasanga et al.   Transboundary and Emerging Diseases

Outbreaks of Foot-and-Mouth Disease in Libya and Saudi Arabia During 2013 Due to an Exotic O/ME-SA/Ind-2001 Lineage Virus

(2014) N. J. Knowles et al.   Transboundary and Emerging Diseases

Reconstructing the origin and transmission dynamics of the 1967–68 foot-and-mouth disease epidemic in the United Kingdom

(2013) Caroline F. Wright et al.   INFECTION GENETICS AND EVOLUTION

Field outbreak strains of serotype O foot-and-mouth disease virus from India with a deletion in the immunodominant βG-βH loop of the VP1 protein

(2012) Biswajit Das et al.   ARCHIVES OF VIROLOGY

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Reconstruction of the Transmission History of RNA Virus Outbreaks Using Full Genome Sequences: Foot-and-Mouth Disease Virus in Bulgaria in 2011

(2012) Begoña Valdazo-González et al.   PLoS One

Options for control of foot-and-mouth disease: knowledge, capability and policy

(2009) D. J. Paton et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Integrating genetic and epidemiological data to determine transmission pathways of foot-and-mouth disease virus

(2008) E. M Cottam et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES