Genomic and epidemiological characterisation of a dengue virus outbreak among blood donors in Brazil

Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015–16: a modelling study

(2017) Moritz U G Kraemer et al.   LANCET INFECTIOUS DISEASES

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

(2017) N. R. Faria et al.   NATURE

Virus genomes reveal factors that spread and sustained the Ebola epidemic

(2017) Gytis Dudas et al.   NATURE

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

(2017) Joshua Quick et al.   Nature Protocols

Increasing airline travel may facilitate co-circulation of multiple dengue virus serotypes in Asia

(2017) Huaiyu Tian et al.   PLoS Neglected Tropical Diseases

Spatial–Temporal Co-Circulation of Dengue Virus 1, 2, 3, and 4 Associated with Coinfection Cases in a Hyperendemic Area of Brazil: A 4-Week Survey

(2016) Elisa H. P. Andrade et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Duration of Dengue Viremia in Blood Donors and Relationships Between Donor Viremia, Infection Incidence and Clinical Case Reports During a Large Epidemic

(2016) Michael P. Busch et al.   JOURNAL OF INFECTIOUS DISEASES

Investigation Into an Outbreak of Dengue-like Illness in Pernambuco, Brazil, Revealed a Cocirculation of Zika, Chikungunya, and Dengue Virus Type 1

(2016) Rodrigo Pessôa et al.   MEDICINE

Epidemiological dynamics of an urban Dengue 4 outbreak in São Paulo, Brazil

(2016) Christian Julián Villabona-Arenas et al.   PeerJ

West Nile Virus Encephalitis: The First Human Case Recorded in Brazil

(2015) Marcelo A. C. S. Vieira et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Emergence and potential for spread of Chikungunya virus in Brazil

(2015) Marcio Roberto Teixeira Nunes et al.   BMC Medicine

Transfusion-Transmitted Dengue and Associated Clinical Symptoms During the 2012 Epidemic in Brazil

(2015) Ester C. Sabino et al.   JOURNAL OF INFECTIOUS DISEASES

First report of autochthonous transmission of Zika virus in Brazil

(2015) Camila Zanluca et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

The global distribution of the arbovirus vectors Aedes aegypti and Ae. albopictus

(2015) Moritz UG Kraemer et al.   eLife

High-resolution gridded population datasets for Latin America and the Caribbean in 2010, 2015, and 2020

(2015) Alessandro Sorichetta et al.   Scientific Data

The global compendium of Aedes aegypti and Ae. albopictus occurrence

(2015) Moritz U. G. Kraemer et al.   Scientific Data

AliView: a fast and lightweight alignment viewer and editor for large datasets

(2014) Anders Larsson   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Potential for Zika virus transmission through blood transfusion demonstrated during an outbreak in French Polynesia, November 2013 to February 2014

(2014) D Musso et al.   Eurosurveillance

Dengue virus type 4 arrives in the state of Rio de Janeiro: a challenge for epidemiological surveillance and control

(2014) Rita MR Nogueira et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

Temporal abundance of Aedes aegypti in Manaus, Brazil, measured by two trap types for adult mosquitoes

(2014) Carolin Marlen Degener et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

Global temperature constraints on Aedes aegypti and Ae. albopictus persistence and competence for dengue virus transmission

(2014) Oliver J Brady et al.   Parasites & Vectors

Global spread of dengue virus types: mapping the 70 year history

(2014) Jane P. Messina et al.   TRENDS IN MICROBIOLOGY

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Detection Of Four Dengue Serotypes Suggests Rise In Hyperendemicity In Urban Centers Of Brazil

(2014) Christian Julián Villabona-Arenas et al.   PLoS Neglected Tropical Diseases

Air Travel Is Associated with Intracontinental Spread of Dengue Virus Serotypes 1–3 in Brazil

(2014) Marcio R. T. Nunes et al.   PLoS Neglected Tropical Diseases

The 2012 Madeira Dengue Outbreak: Epidemiological Determinants and Future Epidemic Potential

(2014) José Lourenço et al.   PLoS Neglected Tropical Diseases

Reconciling Phylodynamics with Epidemiology: The Case of Dengue Virus in Southern Vietnam

(2013) David A. Rasmussen et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The global distribution and burden of dengue

(2013) Samir Bhatt et al.   NATURE

Modelling adult Aedes aegypti and Aedes albopictus survival at different temperatures in laboratory and field settings

(2013) Oliver J Brady et al.   Parasites & Vectors

First isolation of dengue 4 in the state of São Paulo, Brazil, 2011

(2013) Iray Maria Rocco et al.   REVISTA DO INSTITUTO DE MEDICINA TROPICAL DE SAO PAULO

Urbanization and geographic expansion of zoonotic arboviral diseases: mechanisms and potential strategies for prevention

(2013) Scott C. Weaver   TRENDS IN MICROBIOLOGY

Natural, Persistent Oscillations in a Spatial Multi-Strain Disease System with Application to Dengue

(2013) José Lourenço et al.   PLoS Computational Biology

Epidemiological Trends of Dengue Disease in Brazil (2000–2010): A Systematic Literature Search and Analysis

(2013) Maria Glória Teixeira et al.   PLoS Neglected Tropical Diseases

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Improving Bayesian Population Dynamics Inference: A Coalescent-Based Model for Multiple Loci

(2012) M. S. Gill et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Unifying the spatial epidemiology and molecular evolution of emerging epidemics

(2012) O. G. Pybus et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Birth-death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV)

(2012) T. Stadler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimating the Basic Reproductive Number from Viral Sequence Data

(2011) Tanja Stadler et al.   MOLECULAR BIOLOGY AND EVOLUTION

BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics

(2011) Daniel L. Ayres et al.   SYSTEMATIC BIOLOGY

From Re-Emergence to Hyperendemicity: The Natural History of the Dengue Epidemic in Brazil

(2011) Isabel Rodriguez-Barraquer et al.   PLoS Neglected Tropical Diseases

Endemic Dengue Associated with the Co-Circulation of Multiple Viral Lineages and Localized Density-Dependent Transmission

(2011) Jayna Raghwani et al.   PLoS Pathogens

Dengue: twenty-five years since reemergence in Brazil

(2009) Maria Glória Teixeira et al.   Cadernos de Saude Publica

Seasonal dynamics of Aedes aegypti (Diptera: Culicidae) in the northernmost state of Brazil: a likely port-of-entry for dengue virus 4

(2009) Cláudia Torres Codeço et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

Introduction of Dengue Virus 4 (DENV-4) Genotype I into Brazil from Asia?

(2009) Fernando Lucas de Melo et al.   PLoS Neglected Tropical Diseases

Dynamics of the 2006/2007 dengue outbreak in Brazil

(2008) Giovanini E Coelho et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

Dengue Hemorrhagic Fever Transmitted by Blood Transfusion

(2008) Paul A. Tambyah et al.   NEW ENGLAND JOURNAL OF MEDICINE

Remote access to ACNUC nucleotide and protein sequence databases at PBIL

(2007) Manolo Gouy et al.   BIOCHIMIE