4.7 Article

Development of RNAi method for screening candidate genes to control emerald ash borer, Agrilus planipennis

Journal

SCIENTIFIC REPORTS
Volume 7, Issue -, Pages -

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41598-017-07605-x

Keywords

-

Funding

  1. USDA Forest Service Forest Health Center
  2. National Institute of Food and Agriculture, USDA, HATCH [2351177000]

Ask authors/readers for more resources

The ingestion of double-strand RNAs (dsRNA) targeting essential genes in an insect could cause mortality. Based on this principle, a new generation of insect control methods using RNA interference (RNAi) are being developed. In this work, we developed a bioassay for oral delivery of dsRNA to an invasive forest and urban tree pest, the emerald ash borer (EAB, Agrilus planipennis). EAB feeds and develops beneath the bark, killing trees rapidly. This behavior, coupled with the lack of a reliable artificial diet for rearing larvae and adults, make them difficult to study. We found that dsRNA is transported and processed to siRNAs by EAB larvae within 72 h after ingestion. Also, feeding neonate larvae with IAP (inhibitor of apoptosis) or COP (COPI coatomer, beta subunit) dsRNA silenced their target genes and caused mortality. Both an increase in the concentration of dsRNA fed and sequential feeding of two different dsRNAs increased mortality. Here we provide evidence for successful RNAi in EAB, and demonstrate the development of a rapid and effective bioassay for oral delivery of dsRNA to screen additional genes.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Multidisciplinary Sciences

Juvenile hormone membrane signaling phosphorylates USP and thus potentiates 20-hydroxyecdysone action in Drosophila

Yue Gao, Suning Liu, Qiangqiang Jia, Lixian Wu, Dongwei Yuan, Emma Y. Li, Qili Feng, Guirong Wang, Subba R. Palli, Jian Wang, Sheng Li

Summary: The study reveals that JH membrane signaling phosphorylates USP at Ser35 through PKC activation, enhancing the regulation of 20E on fruit fly development. The uspS35A mutant with Ala substitution at Ser35 shows reduced body size and delayed developmental timing.

SCIENCE BULLETIN (2022)

Article Entomology

Transgenic overexpression of P450 genes confers deltamethrin resistance in the fall armyworm, Spodoptera frugiperda

Xien Chen, Subba Reddy Palli

Summary: The study identified the molecular mechanism of deltamethrin resistance in fall armyworm by showing the key role of P450 gene SfCYP321A8, which could be applied in resistance and functional genomics research. Transgenic lines expressing P450 genes were developed and showed significantly increased tolerance to deltamethrin through bioassays, highlighting the potential for further research on insecticide resistance in lepidopteran pests.

JOURNAL OF PEST SCIENCE (2022)

Article Entomology

Midgut-specific expression of CYP321A8 P450 gene increases deltamethrin tolerance in the fall armyworm Spodoptera frugiperda

Xien Chen, Subba Reddy Palli

Summary: A piggyBac-based germline transformation system was established in the fall armyworm, Spodoptera frugiperda, a global agricultural pest. Tissue-specific promoters were identified and used to drive the expression of transgenes, resulting in tissue-specific overexpression. Overexpression of certain genes in the midgut was found to confer insecticide resistance.

JOURNAL OF PEST SCIENCE (2023)

Article Agriculture, Dairy & Animal Science

Signature of Indian native chicken breeds: a perspective

M. Kanakachari, H. Rahman, R. N. Chatterjee, T. K. Bhattacharya

Summary: Native chickens in India play a significant role in the rural economy by providing additional income and nutritional security. This study comprehensively reviews the characteristics of Indian native chicken breeds and differentiates them from exotic breeds through phenotype, molecular parameters, and performance. The research reveals the genetic distance and unique position of Indian chickens in relation to exotic chickens, suggesting that breed signature has the potential to distinguish between the two populations.

WORLDS POULTRY SCIENCE JOURNAL (2022)

Article Entomology

Development of multiple transgenic CRISPR/Cas9 methods for genome editing in the fall armyworm, Spodoptera frugiperda

Xien Chen, Subba Reddy Palli

Summary: This study reports the establishment of multiple transgenic CRISPR/Cas9-based genome editing methods in the global agricultural pest, fall armyworm, Spodoptera frugiperda. Fluorescent proteins suitable for screening for transgenic fall armyworm were identified. The use of U6-tRNA-sgRNA system for sgRNA expression was found to be more efficient in inducing target gene knockout. These methods provide valuable tools for gene editing and functional genomics studies in the fall armyworm and other lepidopteran pests.

JOURNAL OF PEST SCIENCE (2023)

Review Entomology

Invasiveness, biology, ecology, and management of the fall armyworm, Spodoptera frugiperda

Marc Kenis, Giovanni Benelli, Antonio Biondi, Paul-Andre Calatayud, Roger Day, Nicolas Desneux, Rhett D. Harrison, Darren Kriticos, Ivan Rwomushana, Johnnie van den Berg, Francois Verheggen, Yong-Jun Zhang, Lakpo Koku Agboyi, Regis Besmer Ahissou, Malick N. Ba, Julio Bernal, Adeney de Freitas Bueno, Yves Carriere, Geraldo Andrade Carvalho, Xue-Xin Chen, Lizette Cicero, Hannalene du Plessis, Regan Early, Patrick Fallet, Komi K. M. Fiaboe, Dnyaneshwar M. Firake, Georg Goergen, Astrid T. Groot, Raul N. C. Guedes, Ankita Gupta, Gao Hu, Fn Huang, Lara R. Jaber, Edi A. Malo, Christina B. McCarthy, Robert L. Meagher, Samira Mohamed, David Mota Sanchez, Rodney N. Nagoshi, Nicolas Negre, Saliou Niassy, Noboru Ota, Casper Nyamukondiwa, Celso Omoto, Subba Reddy Palli, Roman Pavela, Ricardo Ramirez-Romero, Julio C. Rojas, Sevgan Subramanian, Bruce E. Tabashnik, Wee Tek Tay, Eduardo Gabriel Virla, Su Wang, Trevor Williams, Lian-Sheng Zang, Lisheng Zhang, Kongming Wu

Summary: This article provides a comprehensive review of the fall armyworm, including its biology, worldwide status and spread, management strategies, and recommendations for sustainable management in invaded regions.

ENTOMOLOGIA GENERALIS (2023)

Article Entomology

RNAi in termites (Isoptera): current status and prospects for pest management

Kanakachari Mogilicherla, Amrita Chakraborty, Clauvis Nji Tizi Taning, Guy Smagghe, Amit Roy

Summary: Termites are both keystone species in the ecosystem and pests with significant economic impacts. Scientists are exploring the use of RNAi technology to combat termites, but face challenges due to their social nature and habitats. Genome sequencing projects on termite species offer opportunities for designing RNAi-based termiticides. This perspective highlights existing RNAi-based studies on eusocial termite pests and discusses the prospects for RNAi-termiticides.

ENTOMOLOGIA GENERALIS (2023)

Article Agronomy

Potential effects of RNA interference of Asian longhorned beetle on its parasitoid

Xingeng Wang, Jessica Faucher, Ramesh Kumar Dhandapani, Jian J. Duan, Subba Reddy Palli

Summary: This study investigated the impact of dsRNA-based insecticides on the survival and behavior of a parasitoid wasp. The results showed that direct injection of dsRNA did not affect the wasp's survival, but it indirectly affected the suitability and detectability of host larvae.

PEST MANAGEMENT SCIENCE (2023)

Article Infectious Diseases

County-level surveillance for the lone star tick, Amblyomma americanum, and its associated pathogen, Ehrlichia chaffeensis, in Kentucky

Anna R. Pasternak, Subba R. Palli

Summary: Kentucky experiences a high incidence of ehrlichiosis, primarily transmitted by the lone star tick. Surveillance of tick distribution and pathogen detection is crucial for monitoring the expansion of this important tick vector and the increase in tick-borne diseases.

TICKS AND TICK-BORNE DISEASES (2023)

Article Biochemistry & Molecular Biology

Nanoparticle-Shielded dsRNA Delivery for Enhancing RNAi Efficiency in Cotton Spotted Bollworm Earias vittella (Lepidoptera: Nolidae)

Shelja Sandal, Satnam Singh, Gulshan Bansal, Ramandeep Kaur, Kanakachari Mogilicherla, Suneet Pandher, Amit Roy, Gurmeet Kaur, Pankaj Rathore, Anu Kalia

Summary: This study used RNA-seq transcriptomics and RT-qPCR gene expression analysis to identify suitable reference genes and investigate RNA interference in the spotted bollworm. It was found that nanoparticle-shielded dsRNA can effectively silence target genes, indicating the potential of nanoparticle-based RNAi for pest management.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2023)

Article Entomology

Effects of Low Doses of a Novel dsRNA-based Biopesticide (Calantha) on the Colorado Potato Beetle

Samuel Pallis, Andrei Alyokhin, Brian Manley, Thais Rodrigues, Ethann Barnes, Kenneth Narva

Summary: The Colorado potato beetle (Leptinotarsa decemlineata) is a major pest for potato crops. A new double-stranded RNA insecticide has been found effective in managing the beetle population through RNA interference. Low doses of the insecticide inhibit pupation in larvae and reduce mobility and fertility in adults, particularly in females, which can decrease the overall beetle population and hinder their movement and reproductive success.

JOURNAL OF ECONOMIC ENTOMOLOGY (2023)

Article Multidisciplinary Sciences

The pleiotropic AMPK-CncC signaling pathway regulates the trade-off between detoxification and reproduction

Heng Jiang, Xiangkun Meng, Nan Zhang, Huichen Ge, Jiaping Wei, Kun Qian, Yang Zheng, Yoonseong Park, Subba Reddy Palli, Jianjun Wang

Summary: This study found that deltamethrin-induced oxidative stress activates AMPK, promoting the nuclear translocation of CncC through phosphorylation. CncC acts as a transcription activator of detoxification genes and regulates the expression of genes involved in ecdysteroid biosynthesis and juvenile hormone degradation. This results in increased ecdysteroid levels, decreased juvenile hormone titer, and down-regulated vitellogenin gene expression.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2023)

Article Ecology

Age matters: Life-stage, tissue, and sex-specific gene expression dynamics in Ips typographus (Coleoptera: Curculionidae: Scolytinae)

Aisha Naseer, Kanakachari Mogilicherla, Gothandapani Sellamuthu, Amit Roy

Summary: The Eurasian spruce bark beetle (ESBB) has caused catastrophic damage to Norway spruce forests in Europe, resulting in a significant loss of wood. Traditional forest management strategies have not been effective, and new measures are needed. This study aims to understand the physiology and adaptation of ESBB by analyzing gene expression in different life stages and tissues of the beetle. The findings provide insights into ESBB physiology and adaptation and can be used for future RNAi-based ESBB management.

FRONTIERS IN FORESTS AND GLOBAL CHANGE (2023)

Article Biochemistry & Molecular Biology

Inefficient uptake of small interfering RNAs is responsible for their inability to trigger RNA interference in Colorado potato beetle cells

Jinmo Koo, Dhandapani Gurusamy, Subba Reddy Palli

Summary: There is limited success in using exogenous small interfering RNA (siRNA) or small hairpin RNA (shRNA) to trigger RNA interference (RNAi) in insects. Instead, long double-stranded RNA (dsRNA) is used to induce gene knockdown in insects. In this study, the potency of si/sh RNAs and dsRNA was compared in Colorado potato beetle (CPB) cells. CPB cells showed a highly efficient RNAi response to dsRNA, but si/sh RNAs were inefficient in triggering RNAi in CPB cells.

ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY (2023)

Article Biochemistry & Molecular Biology

N6-adenosine (m6A) mRNA methylation is required for Tribolium castaneum development and reproduction

Yaoyu Jiao, Subba Reddy Palli

Summary: m6A methylation is a common modification of mRNA, which regulates multiple stages of mRNA processing. In this study, the role of m6A modification in insect development was explored using the red flour beetle as a model. Knockdown of m6A writers and readers disrupted ecdysis during eclosion, sterilized the insects, and affected egg laying and embryonic development.

INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2023)

No Data Available